Homologous membrane protein structures (HOMEP) version 3
<p><strong>Homologous membrane protein structures (HOMEP)</strong> version 3 (created 2013)<br> An updated version of v2 <a href="https://doi.org/10.5281/zenodo.2646539">10.5281/zenodo.2646539</a> and v1: <a href="https://doi.org/10.5281/zenodo.2646534">10.5281/zenodo.2646534</a></p> <p><strong>Table 1</strong> = Alpha-helical membrane protein structures in the HOMEP3 data set (2013), listed by family<br> From Stamm M, Forrest LR, Proteins 2015 (Supplementary Table 1):<a href="http://https://www.ncbi.nlm.nih.gov/pubmed/26178143"> https://www.ncbi.nlm.nih.gov/pubmed/26178143</a> </p> <p>Contains the following columns:<br> Protein family, Protein databank identifier, Chain identifier, Name, Source organism, Resolution (Å)</p> <p> </p> <p><strong>Table 2</strong> = Beta-barrel membrane protein structures in the HOMEP3 data set (2013), listed by family<br> From Stamm M, Forrest LR, Proteins 2015 (Supplementary Table 2)</p> <p>Contains the following columns:<br> Protein family, Protein databank identifier, Chain identifier, Name, Source organism, Resolution (Å)</p> <p> </p> <p><strong>HOMEP3_pairs_alpha.txt</strong><br> List of all pairs of protein structure chains of alpha-helical proteins</p> <p> </p> <p><strong>HOMEP3_pairs_beta.txt</strong><br> List of all pairs of protein structure chains of beta-barrel proteins</p> <p> </p> <p><strong>HOMEP3_pdbs.tar.gz</strong><br> All pdb files for individual chains in both alpha-helical and beta-barrel subsets</p>
ShareScore
44/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 8
- Access
- 12
- Reuse readiness
- 8
- Engagement
- 8