Platinum Tandem Repeats

<div> <div> <div> <div> <div> <div> <div> <p>Annotation of tandem repeat loci in the human genome</p> <ul> <li>~7.8 million loci:&nbsp;STRs and VNTRs</li> <li>Minimum locus size 10 bp</li> <li>Maximum locus size 10,000 bp</li> <li>Loci within 50 bp are merged to produce compound/complex loci</li> <li>CHM13-T2T and GRCh38 genomes</li> <li><a title="Tandem Repeat Genotyper on GitHub" href="https://github.com/PacificBiosciences/trgt">TRGT</a> locus definitions and bed files</li> <li>Generated using Tandem Repeats Finder and tr-solve</li> </ul> </div> </div> </div> </div> </div> </div> </div> <div> <div> <div> <div>&nbsp;</div> </div> </div> </div> <p>For more details and the code used to generate the loci, see:</p> <p><a title="PlatinumTRs on Github" href="https://github.com/dashnowlab/PlatinumTRs">https://github.com/dashnowlab/PlatinumTRs</a></p> <p>This data was used to call tandem repeat genotypes using TRGT by the <a title="Platinum Pedigree Consortium on GitHub" href="https://github.com/Platinum-Pedigree-Consortium">Platinum Pedigree Consortium</a>.</p>