cfDNA UniFlow Testfiles
<p>This repository contains files used for testing the correct execution of cfDNA UniFlow prior to productive use. It contains small bam and fastQ files based on IC17 from Snyder et al. 2016 (Cell): <a href="https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSM1833242">GSM1833242</a> / <a href="https://www.ncbi.nlm.nih.gov/sra?term=SRX1120780">SRX1120780</a>.</p> <p>A step-by-step documentation of how these files were generated from the original IC17 sample is included in "create_testsample.md".</p> <p>Original paper:</p> <p>Snyder MW, Kircher M, Hill AJ, Daza RM, Shendure J. Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin. Cell. 2016; doi: 10.1016/j.cell.2015.11.050.</p>
ShareScore
52/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 12
- Harmonization
- 8
- Access
- 20
- Reuse readiness
- 8
- Engagement
- 4
Topics
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