Code and data used in "Designing marine reserve networks to mitigate larval dispersal volatility with the connectivity portfolio effect"

<p>This repository contains the code and data used in "Designing marine reserve networks to mitigate larval dispersal volatility with the connectivity portfolio effect".</p> <p>The files have been placed inside a .rar to maintain the file structure necessary to run Marxan correctly.</p> <p>The main file to run the analyses is "Comparing spatial conservation prioritisation run.R" which uses functions from "Comparing spatial conservation prioritisation functions.R".</p> <p>The main input files are located in data01.Rdata, data02.Rdata, and data03.Rdata, which contain 1. a data frame of planning unit centroids, sizes, and amount of reef habitat, 2. a subset of planning unit data as a matrix, 3-14. migration, probability, and flow larval dispersal matrices, 15-18. larval release dates, 19-34 indices of Oceanic nino index (ONI), El Nino Modoki index (MOD), Dipole Mode Index (DMI), and Pacific Decadal Oscillation (PDO) of coral trout, snapper, rabbitfish, and octopus.</p> <p>&nbsp;</p>