TABLE 1 in Taxonomy and phylogeny of Hypoxylon zhaotongensis sp. nov. (Hypoxylaceae, Xylariales), a bambusicolous fungus from Yunnan, China
<p><b>TABLE 1.</b> Names, strain numbers, and corresponding GenBank accession numbers of the taxa used in this study. Cultures from holotype and epitype specimens are labeled as T and ET respectively. Species highlighted in bold were derived from this study. “/” means sequences data are unavailable in the GenBank database.</p><table><tbody><tr><th></th><th></th><th></th><th><b>GenBank accession numbers</b></th><th></th></tr></tbody><tbody><tr><th><b>Species name</b></th><td><b>Strain numbers</b></td><td><b>Types</b></td><td></td><td></td><td></td><td></td></tr><tr><th></th><td></td><td></td><td><b>ITS</b></td><td><b>LSU</b></td><td><i>RPB2</i></td><td><i>β-tubulin</i></td></tr><tr><th><i>Annulohypoxylon annulatum</i></th><td>CBS 140775</td><td>ET</td><td>KY610418</td><td>KY610418</td><td>KY624263</td><td>KX376353</td></tr><tr><th><i>Annulohypoxylon michelianum</i></th><td>CBS 119993</td><td></td><td>KX376320</td><td>KY610423</td><td>KY624234</td><td>KX271239</td></tr><tr><th><i>Annulohypoxylon truncatum</i></th><td>CBS 140778</td><td>ET</td><td>KY610419</td><td>KY610419</td><td>KY624277</td><td>KX376352</td></tr><tr><th><i>Daldinia bambusicola</i></th><td>CBS 122872</td><td>T</td><td>KY610385</td><td>KY610431</td><td>KY624241</td><td>AY951688</td></tr><tr><th><i>Daldinia childiae</i></th><td>CBS 122881</td><td>T</td><td>KU683757</td><td>MH874773</td><td>KU684290</td><td>KU684129</td></tr><tr><th><i>Daldinia concentrica</i></th><td>CBS 113277</td><td></td><td>AY616683</td><td>KY610434</td><td>KY624243</td><td>KC977274</td></tr><tr><th><i>Daldinia dennisii</i></th><td>CBS 114741</td><td>T</td><td>JX658477</td><td>KY610435</td><td>KY624244</td><td>KC977262</td></tr><tr><th><i>Daldinia eschscholtzii</i></th><td>MUCL 45435</td><td></td><td>JX658484</td><td>KY610437</td><td>KY624246</td><td>KC977266</td></tr><tr><th><i>Daldinia petriniae</i></th><td>MUCL 49214</td><td>ET</td><td>AM749937</td><td>KY610439</td><td>KY624248</td><td>KC977261</td></tr><tr><th><i>Daldinia placentiformis</i></th><td>MUCL 47603</td><td></td><td>AM749921</td><td>KY610440</td><td>KY624249</td><td>KC977278</td></tr><tr><th><i>Daldinia vernicosa</i></th><td>CBS 119316</td><td>ET</td><td>KY610395</td><td>KY610442</td><td>KY624252</td><td>KC977260</td></tr><tr><th><i>Durotheca rogersii</i></th><td>YMJ 92031201</td><td></td><td>EF026127</td><td>/</td><td>JX507794</td><td>EF025612</td></tr><tr><th><i>Durotheca comedens</i></th><td>YMJ 90071615</td><td>T</td><td>EF026128</td><td>/</td><td>JX507793</td><td>EF025613</td></tr><tr><th><b>Species name</b></th><td><b>Strain numbers</b></td><td><b>Types</b></td><td></td><td></td><td></td><td></td></tr><tr><th></th><td></td><td></td><td><b>ITS</b></td><td><b>LSU</b></td><td><i>RPB2</i></td><td><i>β-tubulin</i></td></tr><tr><th><i>Durotheca crateriformis</i></th><td>GMBC0205</td><td>T</td><td>MH645426</td><td>MH645425</td><td>MH645427</td><td>MH049441</td></tr><tr><th><i>Durotheca guizhouensis</i></th><td>GMBC0065</td><td>T</td><td>MH645423</td><td>MH645421</td><td>MH645422</td><td>MH049439</td></tr><tr><th><i>Durotheca rogersii</i></th><td>GMBC0204</td><td></td><td>MH645433</td><td>MH645434</td><td>MH645435</td><td>MH049449</td></tr><tr><th><i>Graphostroma platystomum</i></th><td>CBS 270.87</td><td>T</td><td>JX658535</td><td>DQ836906</td><td>KY624296</td><td>HG934108</td></tr><tr><th><i>Hypomontagnella barbarensis</i></th><td>STMA 14081</td><td>T</td><td>MK131720</td><td>MK131718</td><td>MK135891</td><td>MK135893</td></tr><tr><th><i>Hypomontagnella monticulosa</i></th><td>MUCL 54604</td><td></td><td>KY610404</td><td>KY610487</td><td>KY624305</td><td>KX271273</td></tr><tr><th><i>Hypomontagnella submonticulosa</i></th><td>CBS 115280</td><td></td><td>KC968923</td><td>KY610457</td><td>KY624226</td><td>KC977267</td></tr><tr><th><i>Hypoxylon addis</i></th><td>MUCL 52797</td><td>T</td><td>KC968931</td><td>ON954141</td><td>OP251037</td><td>KC977287</td></tr><tr><th><i>Hypoxylon aveirense</i></th><td>MUM 19.40</td><td>T</td><td>MN053021</td><td>ON954142</td><td>OP251028</td><td>MN066636</td></tr><tr><th><i>Hypoxylon baruense</i></th><td>UCH9545</td><td>T</td><td>MN056428</td><td>ON954143</td><td>/</td><td>MK908142</td></tr><tr><th><i>Hypoxylon canariense</i></th><td>MUCL 47224</td><td></td><td>ON792787</td><td>ON954140</td><td>OP251029</td><td>ON813073</td></tr><tr><th><i>Hypoxylon carneum</i></th><td>MUCL 54177</td><td></td><td>KY610400</td><td>KY610480</td><td>KY624297</td><td>KX271270</td></tr><tr><th><i>Hypoxylon cercidicola</i></th><td>CBS 119009</td><td></td><td>KC968908</td><td>KY610444</td><td>KY624254</td><td>KC977263</td></tr><tr><th><i>Hypoxylon chionostomum</i></th><td>STMA 14060</td><td></td><td>KU604563</td><td>ON954144</td><td>OP251030</td><td>ON813072</td></tr><tr><th><i>Hypoxylon chrysalidosporum</i></th><td>FCATAS2710</td><td>T</td><td>OL467294</td><td>OL615106</td><td>OL584222</td><td>OL584229</td></tr><tr><th><i>Hypoxylon crocopeplum</i></th><td>CBS 119004</td><td></td><td>KC968907</td><td>KY610445</td><td>KY624255</td><td>KC977268</td></tr><tr><th><i>Hypoxylon cyclobalanopsidis</i></th><td>FCATAS2714</td><td>T</td><td>OL467298</td><td>OL615108</td><td>OL584225</td><td>OL584232</td></tr><tr><th><i>Hypoxylon erythrostroma</i></th><td>MUCL 53759</td><td></td><td>KC968910</td><td>ON954154</td><td>OP251031</td><td>KC977296</td></tr><tr><th><i>Hypoxylon eurasiaticum</i></th><td>MUCL 57720</td><td>T</td><td>MW367851</td><td>/</td><td>MW373852</td><td>MW373861</td></tr><tr><th><i>Hypoxylon fendleri</i></th><td>MUCL 54792</td><td></td><td>KF234421</td><td>KY610481</td><td>KY624298</td><td>KF300547</td></tr><tr><th><i>Hypoxylon ferrugineum</i></th><td>CBS 141259</td><td></td><td>KX090079</td><td>/</td><td>/</td><td>KX090080</td></tr><tr><th><i>Hypoxylon fragiforme</i></th><td>MUCL 51264</td><td>ET</td><td>KC477229</td><td>KM186295</td><td>MK887342</td><td>KX271282</td></tr><tr><th><i>Hypoxylon fuscoides</i></th><td>MUCL 52670</td><td>T</td><td>ON792789</td><td>ON954145</td><td>OP251038</td><td>ON813076</td></tr><tr><th><i>Hypoxylon fuscum</i></th><td>CBS 113049</td><td>ET</td><td>KY610401</td><td>KY610482</td><td>KY624299</td><td>KX271271</td></tr><tr><th><i>Hypoxylon gibriacense</i></th><td>MUCL 52698</td><td>T</td><td>KC968930</td><td>ON954146</td><td>OP251026</td><td>ON813074</td></tr><tr><th><i>Hypoxylon griseobrunneum</i></th><td>CBS 331.73</td><td>T</td><td>KY610402</td><td>KY610483</td><td>KY624300</td><td>KC977303</td></tr><tr><th><i>Hypoxylon guilanense</i></th><td>MUCL 57726</td><td>T</td><td>MT214997</td><td>MT214992</td><td>MT212235</td><td>MT212239</td></tr><tr><th><i>Hypoxylon haematostroma</i></th><td>MUCL 53301</td><td>ET</td><td>KC968911</td><td>KY610484</td><td>KY624301</td><td>KC977291</td></tr><tr><th><i>Hypoxylon hainanense</i></th><td>FCATAS2712</td><td>T</td><td>OL467296</td><td>OL616132</td><td>OL584224</td><td>OL584231</td></tr><tr><th><i>Hypoxylon hinnuleum</i></th><td>ATCC 36255,MUCL 3621</td><td>T</td><td>MK287537</td><td>MK287549</td><td>MK287562</td><td>MK287575</td></tr><tr><th><i>Hypoxylon hongheensis</i></th><td>KUMCC 21-0452</td><td></td><td>OM001333</td><td>OM001334</td><td>ON392008</td><td>ON468655</td></tr><tr><th><i>Hypoxylon hongheensis</i></th><td>HKAS 122663</td><td>T</td><td>OM001336</td><td>OM001339</td><td>ON392009</td><td>ON468656</td></tr><tr><th><i>Hypoxylon howeanum</i></th><td>MUCL 47599</td><td></td><td>AM749928</td><td>KY610448</td><td>KY624258</td><td>KC977277</td></tr><tr><th><i>Hypoxylon hypomiltum</i></th><td>MUCL 51845</td><td></td><td>KY610403</td><td>KY610449</td><td>KY624302</td><td>KX271249</td></tr><tr><th><b>Species name</b></th><td><b>Strain numbers</b></td><td><b>Types</b></td><td></td><td></td><td></td><td></td></tr><tr><th></th><td></td><td></td><td><b>ITS</b></td><td><b>LSU</b></td><td><i>RPB2</i></td><td><i>β-tubulin</i></td></tr><tr><th><i>Hypoxylon invadens</i></th><td>MUCL 51475</td><td>T</td><td>MT809133</td><td>MT809132</td><td>MT813037</td><td>MT813038</td></tr><tr><th><i>Hypoxylon investiens</i></th><td>CBS 118183</td><td></td><td>KC968925</td><td>KY610450</td><td>KY624259</td><td>KC977270</td></tr><tr><th><i>Hypoxylon isabellinum</i></th><td>MUCL 53308</td><td>T</td><td>KC968935</td><td>/</td><td>OP251032</td><td>KC977295</td></tr><tr><th><i>Hypoxylon laschii</i></th><td>MUCL 52796</td><td></td><td>JX658525</td><td>/</td><td>OP251027</td><td>ON813075</td></tr><tr><th><i>Hypoxylon lateripigmentum</i></th><td>MUCL 53304</td><td>T</td><td>KC968933</td><td>KY610486</td><td>KY624304</td><td>KC977290</td></tr><tr><th><i>Hypoxylon lechatii</i></th><td>MUCL 54609</td><td></td><td>KF923407</td><td>/</td><td>OP251033</td><td>KF923405</td></tr><tr><th><i>Hypoxylon lenormandii</i></th><td>CBS 119003</td><td></td><td>KC968943</td><td>KY610452</td><td>KY624261</td><td>KC977273</td></tr><tr><th><i>Hypoxylon lienhwacheense</i></th><td>MFLUCC14-1231</td><td></td><td>KU604558</td><td>MK287550</td><td>MK287563</td><td>KU159522</td></tr><tr><th><i>Hypoxylon lividipigmentum</i></th><td>STMA14045</td><td></td><td>ON792788</td><td>/</td><td>/</td><td>ON813077</td></tr><tr><th><i>Hypoxylon lividipigmentum</i></th><td>BCRC 34077</td><td></td><td>JN979433</td><td>/</td><td>/</td><td>AY951735</td></tr><tr><th><i>Hypoxylon macrocarpum</i></th><td>CBS 119012</td><td></td><td>ON792785</td><td>/</td><td>OP251034</td><td>ON813071</td></tr><tr><th><i>Hypoxylon munkii</i></th><td>MUCL 53315</td><td></td><td>KC968912</td><td>/</td><td>OP251035</td><td>KC977294</td></tr><tr><th><i>Hypoxylon musceum</i></th><td>MUCL 53765</td><td></td><td>KC968926</td><td>KY610488</td><td>KY624306</td><td>KC977280</td></tr><tr><th><i>Hypoxylon ochraceum</i></th><td>MUCL 54625</td><td>ET</td><td>KC968937</td><td>/</td><td>KY624271</td><td>KC977300</td></tr><tr><th><i>Hypoxylon olivaceopigmentum</i></th><td>DSM 107924</td><td>T</td><td>MK287530</td><td>MK287542</td><td>MK287555</td><td>MK287568</td></tr><tr><th><i>Hypoxylon perforatum</i></th><td>CBS115281</td><td></td><td>KY610391</td><td>KY610455</td><td>KY624224</td><td>KX271250</td></tr><tr><th><i>Hypoxylon petriniae</i></th><td>CBS 114746</td><td>T</td><td>KY610405</td><td>KY610491</td><td>KY624279</td><td>KX271274</td></tr><tr><th><i>Hypoxylon pilgerianum</i></th><td>STMA 13455</td><td></td><td>KY610412</td><td>KY610412</td><td>KY624308</td><td>KY624315</td></tr><tr><th><i>Hypoxylon porphyreum</i></th><td>CBS 119022</td><td></td><td>KC968921</td><td>KY610456</td><td>KY624225</td><td>KC977264</td></tr><tr><th><i>Hypoxylon pseudofuscum</i></th><td>DSM112038</td><td>T</td><td>MW367857</td><td>MW367848</td><td>MW373858</td><td>MW373867</td></tr><tr><th><i>Hypoxylon pulicicidum</i></th><td>CBS 122622</td><td>T</td><td>JX183075</td><td>KY610492</td><td>KY624280</td><td>JX183072</td></tr><tr><th><i>Hypoxylon rickii</i></th><td>MUCL 53309</td><td>ET</td><td>KC968932</td><td>KY610416</td><td>KY624281</td><td>KC977288</td></tr><tr><th><i>Hypoxylon rubiginosum</i></th><td>MUCL 52887</td><td>ET</td><td>KC477232</td><td>KY610469</td><td>KY624266</td><td>KY624311</td></tr><tr><th><i>Hypoxylon samuelsii</i></th><td>MUCL 51843</td><td>ET</td><td>KC968916</td><td>KY610466</td><td>KY624269</td><td>KC977286</td></tr><tr><th><i>Hypoxylon sporistriatatunicum</i></th><td>UCH9542</td><td>T</td><td>MN056426</td><td>/</td><td>OP251036</td><td>MK908140</td></tr><tr><th><i>Hypoxylon subticinense</i></th><td>MUCL 53752</td><td></td><td>KC968913</td><td>/</td><td>/</td><td>KC977297</td></tr><tr><th><i>Hypoxylon texense</i></th><td>DSM 107933</td><td>T</td><td>MK287536</td><td>MK287548</td><td>MK287561</td><td>MK287574</td></tr><tr><th><i>Hypoxylon ticinense</i></th><td>CBS 115271</td><td></td><td>JQ009317</td><td>KY610471</td><td>KY624272</td><td>AY951757</td></tr><tr><th><i>Hypoxylon trugodes</i></th><td>MUCL 54794</td><td>ET</td><td>KF234422</td><td>KY610493</td><td>KY624282</td><td>KF300548</td></tr><tr><th><i>Hypoxylon vogesiacum</i></th><td>CBS 115273</td><td></td><td>KC968920</td><td>KY610417</td><td>KY624283</td><td>KX271275</td></tr><tr><th><i>Hypoxylon wuzhishanense</i></th><td>FCATAS2708</td><td>T</td><td>OL467292</td><td>OL615104</td><td>OL584220</td><td>OL584227</td></tr><tr><th><i>Hypoxylon zhaotongensis</i></th><td><b>GMBCC1168</b></td><td><b>T</b></td><td><b>OP597690</b></td><td><b>OP598100</b></td><td><b>OP615662</b></td><td><b>OP615660</b></td></tr><tr><th><i>Hypoxylon zhaotongensis</i></th><td><b>GMBCC1157</b></td><td></td><td><b>OP597691</b></td><td><b>OP598101</b></td><td><b>OP615663</b></td><td><b>OP615661</b></td></tr><tr><th><i>Jackrogersella cohaerens</i></th><td>CBS 119126</td><td></td><td>KY610396</td><td>KY610497</td><td>KY624270</td><td>KY624314</td></tr><tr><th><b>Species name</b></th><td><b>Strain numbers</b></td><td><b>Types</b></td><td></td><td></td><td></td><td></td></tr><tr><th></th><td></td><td></td><td><b>ITS</b></td><td><b>LSU</b></td><td><i>RPB2</i></td><td><i>β-tubulin</i></td></tr><tr><th><i>Jackrogersella multiformis</i></th><td>CBS 119016</td><td>ET</td><td>KC477234</td><td>KY610473</td><td>KY624290</td><td>KX271262</td></tr><tr><th><i>Natonodosa speciosa</i></th><td>CLM-RV86</td><td>T</td><td>MF380435</td><td>MF380435</td><td>MH745150</td><td>/</td></tr><tr><th><i>Parahypoxylon papillatum comb. nov.</i></th><td>ATCC 58729</td><td>T</td><td>KC968919</td><td>KY610454</td><td>KY624223</td><td>KC977258</td></tr><tr><th><i>Parahypoxylon ruwenzoriense sp. nov.</i></th><td>MUCL51392</td><td>T</td><td>ON792786</td><td>/</td><td>OP251039</td><td>ON813078</td></tr><tr><th><i>Pyrenopolyporus hunteri</i></th><td>MUCL 52673</td><td>ET</td><td>KY610421</td><td>KY610472</td><td>KY624309</td><td>KU159530</td></tr><tr><th><i>Pyrenopolyporus laminosus</i></th><td>MUCL 53305</td><td>T</td><td>KC968934</td><td>KY610485</td><td>KY624303</td><td>KC977292</td></tr><tr><th><i>Pyrenopolyporus nicaraguense</i></th><td>CBS 117739</td><td></td><td>AM749922</td><td>KY610489</td><td>KY624307</td><td>KC977272</td></tr><tr><th><i>Rhopalostroma angolense</i></th><td>CBS 126414</td><td></td><td>KY610420</td><td>KY610459</td><td>KY624228</td><td>KX271277</td></tr><tr><th><i>Rostrohypoxylon terebratum</i></th><td>CBS 119137</td><td>T</td><td>DQ631943</td><td>DQ840069</td><td>DQ631954</td><td>DQ840097</td></tr><tr><th><i>Ruwenzoria pseudoannulata</i></th><td>MUCL 51394</td><td>T</td><td>KY610406</td><td>KY610494</td><td>KY624286</td><td>KX271278</td></tr><tr><th><i>Thamnomyces dendroidea</i></th><td>CBS 123578</td><td>T</td><td>FN428831</td><td>KY610467</td><td>KY624232</td><td>KY624313</td></tr><tr><th><i>Xylaria arbuscula</i></th><td>CBS 126415</td><td></td><td>KY610394</td><td>KY610463</td><td>KY624287</td><td>KX271257</td></tr><tr><th><i>Xylaria hypoxylon</i></th><td>CBS 122620</td><td>ET</td><td>KY610407</td><td>KY610495</td><td>KY624231</td><td>KX271279</td></tr></tbody></table><p>......continued on the next page</p><p>......continued on the next page</p><p>......continued on the next page</p><p><b>Abbreviations: CBS:</b> Culture collection of the Westerdijk Fungal Biodiversity Institute, Utrecht, Netherlands; <b>MUCL:</b> Agrofood & Environmental Fungal Collection; <b>GMBC:</b> Guizhou Medical University Culture Collection; <b>STMA:</b> HZI culture collection, Helmholtz Centre for Infection Research, Braunschweig, Germany; <b>MUM:</b> Micoteca da Universidade do Minho; <b>UCH:</b> Universidad Autonoma de Chiriqui; <b>FCATAS:</b> Fungarium of the Institute of Tropical Bioscience and Biotechnology, Chinese Academy of Tropical Agricultural Sciences; <b>KUMCC:</b> Kunming Institute of Botany Culture Collection; <b>HKAS:</b> Cryptogamic Herbarium of Kunming Institute of Botany, Chinese Academy of Sciences; <b>MFLUCC:</b> Mae Fah Luang University Culture Collection, Chiang Rai, Thailand; <b>JF:</b> Jonkershoek Forestry Research Centre, Environment Affairs Department; <b>BCRC:</b> Bioresource Collection and Research Center; <b>DSM:</b> Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH; <b>GMBCC:</b> Guizhou Medical University Culture Collection, Guiyang, China; <b>CLM -RV:</b> -; <b>ATCC:</b> American Type Culture Collection; <b>YMJ:</b> YuMing, Ju; “-”: not available in the abbreviations.</p>
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