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Processed data used in transcriptome- metabolome-wide association study

<p>Processed_RNASeq_RPKM.txt&nbsp;contains RPKM levels&nbsp;for 45484 genes quantified in&nbsp;555 individuals from RNA-Seq of lymphoblastoid&nbsp;cell lines (LCLs).</p> <p>Processed_NMRpeaks_baseline.txt contains&nbsp;binned, normalized and standardised (z-scored)&nbsp;NMR peak intensities for 1276 bins quantified in 555 individuals from urine samples taken at baseline. NMR spectra were acquired at 300 K on a Bruker 16.4 T Avance II 700 MHz NMR spectrometer (Bruker Biospin, Rheinstetten, Germany) using a standard 1H detection pulse sequence with water suppression. The spectra were referenced to the TSP signal and phase and baseline corrected.</p> <p>Processed_NMRpeaks_followup.txt&nbsp;contains&nbsp;binned, normalized and standardised (z-scored)&nbsp;NMR peak intensities for&nbsp;1289 bins quantified in 315 individuals from&nbsp;urine samples taken during follow-up. NMR spectra&nbsp;were acquired with an Avance III HD 600 NMR spectrometer. Spectra were referenced to the TSP signal and phase and baseline corrected.</p> <p>More details on the data set can be found in&nbsp;S&ouml;nmez Flitman et al. (doi:&nbsp;https://doi.org/10.1101/2020.05.22.110197).</p>

ShareScore

44/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
20
Reuse readiness
8
Engagement
4

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