CircaSCOPE demo input for CellProfiler pipeline
<p>This is a demo dataset to use as input images for the CellProfiler pipeline of CircaSCOPE. Images were retrieved with IncuCyte Zoom microscope (Essen BioScience). </p> <p>The images are arranged in directories as follows: YYMM/HH/Vessel/Well-Site-Channel.tif</p> <p>[YY - year,</p> <p>MM - month,</p> <p>HH - hour,</p> <p>Vessel - the vessel number, in this demo- 479 contains untreated control, and 480 contains 100nM Dexamethasone-treated cells</p> <p>Well - coordinates in 24-well plate</p> <p>Site - the field of view number inside each well, between 1-16</p> <p>Channel - C1- green, C2- red, P- phase]</p> <p> </p> <p> </p>
ShareScore
32/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 0