Skip to main content
zenodoopen

Neuropixels single-mouse LFP data

<p>Single-mouse Neuropixels recordings (spikes and LFPs) in NWB format. Dataset used in the paper &quot;Cross-population coupling of neural activity based on Gaussian process current source densities&quot; by Klein, N., Siegle, J.H., Teichert, T., and Kass, R.E.&nbsp;(preprint:&nbsp;<a href="https://arxiv.org/abs/2104.10070">https://arxiv.org/abs/2104.10070</a>).&nbsp;</p> <p>The data is part of the Allen Brain Observatory Neuropixels dataset (&copy;2019 Allen Institute for Brain Science, available from <a href="https://portal.brain-map.org/explore/circuits/visual-coding-neuropixels">https://portal.brain-map.org/explore/circuits/visual-coding-neuropixels</a>). Six Neuropixels probes were simultaneously inserted through visual cortex, hippocampus, thalamus, and midbrain. On each probe, LFP data was recorded from up to 374 electrode locations in a checkerboard layout spanning two spatial dimensions: four columns spaced 16 microns apart, with 20 micron spacing between rows. LFP data was acquired at 2500 Hz after applying a 1000 Hz low-pass filter. Boundaries between regions were manually identified based on decreases in unit density as well as physiological signatures (such as elevated theta-band activity in the hippocampus). LFP electrodes without region labels were not included in the analysis.&nbsp;Spike trains and downsampled LFP data for this mouse (subject ID: 730760270; session ID: 755434585) can be accessed via the AllenSDK or via the DANDI Archive <a href="https://dandiarchive.org/dandiset/000021/draft">https://dandiarchive.org/dandiset/000021/draft</a>. The original LFP data used for this analysis is available as part of the Allen Brain Observatory AWS Public Data Set <a href="https://registry.opendata.aws/allen-brain-observatory/">https://registry.opendata.aws/allen-brain-observatory/</a>.<br> &nbsp;</p>

ShareScore

36/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
16
Reuse readiness
8
Engagement
4

Dataset details

Repository
zenodo
Published
July 30, 2021
License
cc-by-4.0
DOI
10.5281/zenodo.5150707

Scored with release 0.9.0

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.