Mappability .bigwig reference files for hg38/hg19; various read lengths
<p>This dataset contains reference mappability .bigwig files for the reference genomes hg38 and hg19, for various read lengths. The files were generated with the GEM library (https://sourceforge.net/projects/gemlibrary/files/gem-library/Binary%20pre-release%203/GEM-binaries-Linux-x86_64-core_i3-20130406-045632.tbz2) using <a href="https://raw.githubusercontent.com/epigen/LIQUORICE/master/liquorice/create_mappability_bigwigs.sh">this</a> script (based on <a href="https://evodify.com/gem-mappability/">this</a> work).</p> <p>The files can be used as input for LIQUORICE (<a href="https://liquorice.readthedocs.io">https://liquorice.readthedocs.io</a>) - just select the file that matches your sequencing protocol (i.e. read length) and the reference genome of your mapped .bam files.</p>
ShareScore
36/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 8
- Access
- 16
- Reuse readiness
- 0
- Engagement
- 4
Topics
Dataset details
- Repository
- zenodo
- Published
- September 23, 2021
- License
- cc-by-4.0
- DOI
- 10.5281/zenodo.5521423
Scored with release 0.9.0
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