Qiime2 classifiers
<p>These files are companion classifiers for QIIME2 snakemake pipeline.</p> <p> </p> <p>If you use these data files please cite:</p> <ul> <li> <p>Michael S Robeson II, Devon R O’Rourke, Benjamin D Kaehler, Michal Ziemski, Matthew R Dillon, Jeffrey T Foster, Nicholas A Bokulich. RESCRIPt: Reproducible sequence taxonomy reference database management for the masses. bioRxiv 2020.10.05.326504; doi: <a href="https://doi.org/10.1101/2020.10.05.326504">https://doi.org/10.1101/2020.10.05.326504</a></p> </li> <li> <p>Bokulich, N.A., Kaehler, B.D., Rideout, J.R. et al. Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin. Microbiome 6, 90 (2018). <a href="https://doi.org/10.1186/s40168-018-0470-z">https://doi.org/10.1186/s40168-018-0470-z</a></p> </li> <li> <p>See the <a href="https://www.arb-silva.de/">SILVA website</a> and the latest <a href="https://www.nature.com/articles/ismej2011139">Greengenes publication</a> for the latest citation information for these reference databases.</p> </li> <li> <p>We will update this information later.</p> </li> </ul>
ShareScore
40/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 4