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Ginkgo Chauvel's left and right superficial white matter atlas of the chimpanzee brain

<p><strong>Superficial Chauvel&#39;s chimpanzee white matter atlas.</strong></p> <p>The left and right superficial white matter atlas of the chimpanzee brain was built upon a cohort of 39 in vivo chimpanzees magnetic resonance imaging (MRI) scans shared by the Pr. William D. Hopkins, registered on a template space (Juna.chimp template from Vickery et al. 2020). The construction of this atlas is based on the analysis of the anatomical and diffusion MRI dataset using the&nbsp; tractography and fiber clustering tools available from the Ginkgo toolbox (CEA, NeuroSpin, BAOBAB, GAIA, Ginkgo Team, <a href="https://framagit.org/cpoupon/gkg">https://framagit.org/cpoupon/gkg</a>). The atlas can be visualized using the BrainVISA/Anatomist viewer available at <a href="https://brainvisa.info/web/download.html">https://brainvisa.info/web/download.html</a>.</p> <p><br> The left hemisphere atlas is composed of 422 superficial white matter bundles and the right hemisphere atlas of 400 superficial white matter bundles.<br> <br> The 38 cortical regions considered for the left and right hemispheres were : the anterior/middle/posterior superior frontal gyrus (aSFG/mSFG/pSFG) ; the anterior and posterior middle frontal gyrus (aMFG/pMFG) ; the anterior/middle/posterior inferior frontal gyrus (aIFG/mIFG/pIFG) ; the medial lateral orbitofrontal cortex (mOFC/ lOFC) ; the superior, middle, inferior precentral gyrus (sPrCG / mPrCG / iPrCG) ; the Paracentral Lobule (PCL) ; the anterior and posterior insula (alns / plns) ; the anterior, posterior superior temporal gyrus (aSTG/pSTG) ; the anterior, posterior middle temporal gyrus (aMTG/pMTG) ; the anterior and posterior inferior temporal gyrus (aITG, pITG) ; the anterior and posterior fusiform gyrus (aFFG/pFFG) ; the superior, middle and inferior postcentral gyrus (sPoCG/mPoCG/iPoCG) ; the superior parietal lobule (SPL) ; the supramarginal gyrus (SMG) ; the angular gyrus (AnG) ; the Precuneus (PCun) ; the cuneus (Cun) ; the Lingual Gyrus (LG) ; the superior, middle, inferior occipital gyrus (sOG / mOG/ iOG) ; the entorhinal Cortex (EnC) ; the parahippocampal gyrus (PHC).<br> <br> The atlas is provided using the Anatomist *.bundles/*.bundlesdata format for which metainformation can be found in the *.bundles file among which:<br> - the labels of the different white matter bundles (&#39;labels&#39; entry) following the syntactic rule&nbsp; &quot;&lt;right/left&gt;_&lt;roi1&gt;_&lt;roi2&gt;_&lt;clusterId&gt;&quot;,<br> - the number of streamlines populating each white matter bundle (&#39;curve3d_counts&#39; entry), in the same order as the &#39;labels&#39; key,<br> - the total number of white matter bundles (&#39;item_count&#39; entry),<br> - the total number of streamlines (&#39;curves_count&#39; entry)</p> <p>&nbsp;</p>

ShareScore

40/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
16
Reuse readiness
8
Engagement
4

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