Skip to main content
zenodoopen

Prediction of metabolites associated with somatic mutations in cancers

<ul> <li>GEMs_AML: 16 acute myeloid leukemia (AML) patient-specific&nbsp;genome-scale metabolic models (GEMs) reconstructed using their corresponding RNA-seq data and Recon 2M.2</li> <li>GEMs_PCAWG: 943 cancer patient-specific&nbsp;GEMs for 24 different cancer types reconstructed using the&nbsp;Pan-Cancer Analysis of Whole Genomes (PCAWG) RNA-seq&nbsp;data and&nbsp;generic human GEM &#39;Recon 2M.2&#39;</li> <li>GEMs_RCC: 20&nbsp;renal cell carcinoma (RCC)&nbsp;patient-specific GEMs reconstructed using their corresponding RNA-seq data and Recon 2M.2</li> <li>GEMs_TCGA_LAML: 113 AML patient-specific GEMs reconstructed using The Cancer Genome Atlas (TCGA) LAML&nbsp;RNA-seq data and Recon 2M.2</li> </ul>

ShareScore

40/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
16
Reuse readiness
8
Engagement
4

Topics