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Protein structure model predictions for secreted fungal proteins

<p><strong>Dataset A - Alphafold2 prediction output data for 753 secreted proteins of <em>Rhizophagus irregularis </em>DAOM197198</strong>.&nbsp;Gene IDs are taken from the annotation by Yildirir et al. 2021,&nbsp;<a href="https://doi.org/10.1111/nph.17842">doi.org/10.1111/nph.17842</a></p> <p><strong>Dataset B - Alphafold2 prediction output data for 10 fungal effectors.</strong><strong>&nbsp;</strong>These are nine effectors from&nbsp;<em>Fusarium oxysporum</em>&nbsp;f. sp.<em>&nbsp;lycopersici</em>&nbsp;and RiSLM from&nbsp;<em>Rhizophagus irregularis</em>&nbsp;as well as their amino acid sequences. Signal peptides and sequences preceding a predicted Kex2 processing site were removed.</p> <p><strong>Dataset C - Alphafold2 prediction output data for 454 matches of a MycFOLD-HMM search</strong>&nbsp;across the Mycocosm genome database (<a href="https://mycocosm.jgi.doe.gov/mycocosm/home">https://mycocosm.jgi.doe.gov/mycocosm/home</a>) and 36 Glomeromycotina fungal genomes.</p>

ShareScore

40/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
16
Reuse readiness
8
Engagement
4

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