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Supplemental Data 4

<ul> <li>file contains link for download <ul> <li> <p>Download contains KG, embeddings, uniprot2genename, and reactome2pathwayname files</p> </li> <li> <p><code>data/GP2VEC_emb_walk_file_40_40_0_0_bwV4_s256_w7_n5_mc5.txt</code>: embedding KG file</p> </li> <li> <p><code>data/GP2VEC_emb_walk_file_40_40_0_0_bwV4_s256_w7_n5_mc5</code>: embedding KG file</p> </li> <li> <p><code>data/df_edges.csv</code>: main KG edge file</p> </li> <li> <p><code>data/df_node.csv</code>: KG node file</p> </li> <li> <p><code>data/df_relation.csv</code>: KG relation type file</p> </li> <li> <p><code>data/df_type.csv</code>: KG node type file</p> </li> <li> <p><code>data/original/GeneNameMapping.txt</code>: UniProtID to name mapping file. One of the input files for GeneratingKinaseGraph</p> </li> <li> <p><code>data/original/ReactomePathways.txt</code>: ReactomeID to name mapping file. One of the input files for GeneratingKianseGraph</p> </li> </ul> </li> </ul>

ShareScore

40/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
16
Reuse readiness
8
Engagement
4

Topics

Dataset details

Repository
zenodo
Published
January 15, 2023
License
cc-by-4.0
DOI
10.5281/zenodo.7541826

Scored with release 0.9.0

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