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zenodoopen

Sequencing data for "Identifying and tracking mobile elements..." by van Dijk et al. (2023)

<p>The dataset contains the following directories:</p> <p><strong>All_raw_MAGs</strong>: all cross-assembled MAGs per community, with a text file for their BAT annotation results. Cross-assembly was done by combining all time points.&nbsp;<br> <strong>Candidatus_Saccharibacterium_MAGs</strong>: identified nanobacterium MAGs from various communities.&nbsp;<br> <strong>Cellvibrio_MAGs</strong>: identified cellvibrio spp. across communities.&nbsp;<br> <strong>Cellvibrio_Plasmids:</strong>&nbsp;Cp plasmids belonging to Cellvibrio (C1) which transferred from communities 8 to 4, 6, 9, and 10 (in horizontal communities)<br> <strong>Interactive_Dataset:</strong>&nbsp;HTML5 (Plotly)&nbsp;graphs to explore all xenotypic sequences and MAG abundance plots<br> <strong>Rscript_mock_data</strong>: R script used to design the mock data for the benchmark set.&nbsp;</p> <p>And a single spreadsheet (<strong>Xenoseq_mastersheet.xlsx,&nbsp;</strong>Supplementary Table 1) of data discussed in the main text.</p>

ShareScore

32/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
16
Reuse readiness
8
Engagement
0