DEcancer: Proteomics Datasets of Liquid Biopsy Samples
<p>Two datasets used to build the DEcancer pipelines from open access data. The tables in the cancerseek folder are uploaded for convenience and can also be found from the supplementary data of <a href="https://doi.org/10.1016/j.isci.2019.04.035">Early Cancer Detection from Multianalyte Blood Test Results</a> paper. The nanoparticles dataset is processed with the Perseus software on the <a href="http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD017052">original data</a> from Blume <em>et al's</em> Rapid, deep and precise profiling of the plasma proteome with multi-nanoparticle protein corona. These are distinct datasets in that the nanoparticles is a cohort of patients from a high dimensional, low sample size proteomics dataset.</p>
ShareScore
40/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 4