SpliceAI_rocksdb_hg19_chr11
<p>SpliceAI RocksDB for chromosome 11 of hg19 as used in the AbSplice publication: <a href="https://www.nature.com/articles/s41588-023-01373-3">https://www.nature.com/articles/s41588-023-01373-3</a></p> <p>Precomputed SpliceAI scores for all SNVs and indels up to 4 nucleotides are stored in this database. To use this database for fast computation of SpliceAI predictions see: <a href="https://github.com/gagneurlab/spliceai_rocksdb">https://github.com/gagneurlab/spliceai_rocksdb</a></p> <p>This is also implemented in the AbSplice package: <a href="https://github.com/gagneurlab/absplice">https://github.com/gagneurlab/absplice</a></p> <p>This dataset includes SpliceAI scores. The scores are free for academic and not-for-profit use; other use requires a commercial license from Illumina, Inc., see the GitHub repository of SpliceAI: <a href="https://github.com/Illumina/SpliceAI/tree/master">https://github.com/Illumina/SpliceAI/tree/master</a></p>
ShareScore
36/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 0