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SpliceAI_rocksdb_hg19_chr16

<p>SpliceAI RocksDB for chromosome 16 of hg19 as used in the AbSplice publication:&nbsp;<a href="https://www.nature.com/articles/s41588-023-01373-3">https://www.nature.com/articles/s41588-023-01373-3</a></p> <p>Precomputed SpliceAI scores for all SNVs and indels up to 4 nucleotides are stored in this database. To use this database for fast computation of SpliceAI predictions see:&nbsp;<a href="https://github.com/gagneurlab/spliceai_rocksdb">https://github.com/gagneurlab/spliceai_rocksdb</a></p> <p>This is also implemented in the AbSplice package:&nbsp;<a href="https://github.com/gagneurlab/absplice">https://github.com/gagneurlab/absplice</a></p> <p>This dataset includes SpliceAI scores. The scores are free for academic and not-for-profit use; other use requires a commercial license from Illumina, Inc., see the GitHub repository of SpliceAI:&nbsp;<a href="https://github.com/Illumina/SpliceAI/tree/master">https://github.com/Illumina/SpliceAI/tree/master</a></p>

ShareScore

36/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
16
Reuse readiness
8
Engagement
0

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