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ZeroCostDL4Mic - Stardist 2D example training and test dataset (light)

<p><strong>Name</strong>: ZeroCostDL4Mic - Stardist 2D example training and test dataset (light)</p> <p>(see&nbsp;<a href="http://https//github.com/HenriquesLab/ZeroCostDL4Mic/wiki">our Wiki</a>&nbsp;for details)</p> <p><strong>Data type</strong>: Paired microscopy images (fluorescence) and corresponding masks</p> <p><strong>Microscopy data type</strong>: Fluorescence microscopy (SiR-DNA) and masks obtained via manual segmentation (see&nbsp;<a href="https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist">https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist</a>&nbsp;for details about the segmentation)</p> <p><strong>Microscope</strong>: Spinning disk confocal microscope with a 20x 0.8 NA objective</p> <p><strong>Cell type</strong>: DCIS.COM LifeAct-RFP cells</p> <p><strong>File format</strong>: .tif (16-bit for fluorescence and 8 and 16-bit for the masks)</p> <p><strong>Image size</strong>: 1024x1024 (Pixel size: 634 nm)</p> <p>&nbsp;</p> <p><strong>Author(s)</strong>: Johanna Jukkala<sup>1,2</sup>&nbsp;and Guillaume Jacquemet<sup>1,2</sup></p> <p><strong>Contact email</strong>: guillaume.jacquemet@abo.fi</p> <p><strong>Affiliation</strong>&nbsp;:&nbsp;</p> <p>1) Faculty of Science and Engineering, Cell Biology, &Aring;bo Akademi University, 20520 Turku, Finland</p> <p>2) Turku Bioscience Centre, University of Turku and &Aring;bo Akademi University, FI-20520 Turku, Finland</p> <p><strong>Funding bodies</strong>: G.J. was supported by grants awarded by the Academy of Finland, the Sigrid Juselius Foundation and &Aring;bo Akademi University Research Foundation (CoE CellMech) and by Drug Discovery and Diagnostics strategic funding to &Aring;bo Akademi University.</p>

ShareScore

32/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
16
Reuse readiness
8
Engagement
0