TMI cheese metagenomics sourmash output files
<p>Sourmash output files from signature sketches, compare, gather, and taxonomy of time-series cheese metagenomes generated using both short- and long-read sequencing technologies. Originally generated as part of the pub <a href="https://research.arcadiascience.com/pub/data-set-metagenomics-timecourse-cheese/release/1">"Paired long- and short-read metagenomics of cheese rind microbial communities at multiple time points"</a>. Analysis code of this data provided on Github at <a href="https://github.com/Arcadia-Science/metagenomics-of-cheese-rind-microbiomes">https://github.com/Arcadia-Science/metagenomics-of-cheese-rind-microbiomes</a>. </p> <p>To directly analyze this data, download and unzip the tarball. Clone the Github repository and point to the 2023-05-23-TMI-processed-data directory within a project using the `scripts/TMI-sourmash-explore.R` script. Install the packages used in the script if necessary. </p>
ShareScore
36/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 0