Genome and annotation data for the salp Pegea sp.
<p>Genome assembly, structural annotation, functional annotation, quantification, and long-read transcriptome data for the salp <em>Pegea sp.</em></p> <p>Files:</p> <p>RAD2-039_final_filtered_genome.fasta --> Genome assembly file</p> <p>RAD2-039_genome_mRNAs.fasta --> mRNAs derived from the genome using FINDER</p> <p>RAD2-039_genome_proteins.fasta --> proteins derived from the genome<br>RAD2-039_FINDER_BRAKER_PROT.gtf --> annotation file </p> <p>RAD2-039_iproscan.tsv --> functional annotation (interproscan) of the proteins</p> <p>RAD2-039_expressionMatrix_cpms.csv --> gene expression data in counts per million from two replicate samples of the same animal<br>RAD2-039_ISOseq_clustered.hq.fasta --> long read mRNA data (PacBio IsoSeq)</p> <p> </p>
ShareScore
28/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 4
- Access
- 12
- Reuse readiness
- 8
- Engagement
- 0