zenodoopen
Structure-Based Discovery of Mouse Trace Amine-Associated Receptor 5 Antagonists
<p>Topology, parameter and coordinates files of the Molecular dynamics (MD) simulations of mTAAR5 3D models in complex with the three novel antagonists (Compound 9, 10 and 11, Table S4). We used ACEMD3 (v3.5.1) as a molecular engine, CHARMM36 as force field. The three replicas of 200 ns (xtc files) were concatened in a single trajectory for each system. Water molecules, ions, and membrane atoms (POPC: phosphatidylcholine) atoms were removed from the original trajectories and topology before the upload.</p>
ShareScore
40/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 4