MS-BioGraphs MSA500

<p><a href="https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs/">https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs/</a></p> <table> <tbody> <tr> <td>Name</td> <td>MS-BioGraphs &ndash; MSA500</td> </tr> <tr> <td>URL</td> <td><a href="https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA500">https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA500</a></td> </tr> <tr> <td>Graph Explanation</td> <td>Vertices represent proteins and each edge represents the sequence similarity between its two endpoints</td> </tr> <tr> <td>Edge Weighted</td> <td>Yes</td> </tr> <tr> <td>Directed</td> <td>Yes</td> </tr> <tr> <td>Number of Vertices</td> <td>1,757,323,526</td> </tr> <tr> <td>Number of Edges</td> <td>1,244,904,754,157</td> </tr> <tr> <td>Maximum In-Degree</td> <td>229,442</td> </tr> <tr> <td>Maximum Out-Degree</td> <td>814,461</td> </tr> <tr> <td>Minimum Weight</td> <td>98</td> </tr> <tr> <td>Maximum Weight</td> <td>634,925</td> </tr> <tr> <td>Number of Zero In-Degree Vertices</td> <td>6,437,984</td> </tr> <tr> <td>Number of Zero Out-Degree Vertices</td> <td>16,843,087</td> </tr> <tr> <td>Average In-Degree</td> <td>711.0</td> </tr> <tr> <td>Average Out-Degree</td> <td>715.3</td> </tr> <tr> <td>Size of The Largest Weakly Connected Component</td> <td>1,244,203,865,823</td> </tr> <tr> <td>Number of Weakly Connected Components</td> <td>148,861,367</td> </tr> <tr> <td>Creation Details</td> <td><a href="https://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-Sequence-Similarity-Graph-Datasets/">MS-BioGraphs: Sequency Similarity Graph Datasets</a></td> </tr> <tr> <td>Format</td> <td><a href="https://webgraph.di.unimi.it/">WebGraph</a></td> </tr> <tr> <td>License</td> <td><a href="https://creativecommons.org/licenses/by-nc-sa/2.0/">CC BY-NC-SA</a></td> </tr> <tr> <td>QUB IDF</td> <td>2223-052</td> </tr> <tr> <td>DOI</td> <td><a href="https://doi.org/10.5281/zenodo.7820810">10.5281/zenodo.7820810</a></td> </tr> <tr> <td>Citation</td> <td> <pre> Koohi Esfahani, Mohsen, Boldi, Paolo, Vandierendonck, Hans, Kilpatrick, Peter, Vigna,Sebastiano. (2023). MS-BioGraphs - MSA500. https://doi.org/10.5281/zenodo.7820810. http://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA500.</pre> </td> </tr> <tr> <td>Bibtex</td> <td> <pre> @misc{MS-BioGraphs-MSA500, year = {2023}, author = {Mohsen Koohi Esfahani and Paolo Boldi and Hans Vandierendonck and Peter Kilpatrick and Sebastiano Vigna}, title = {{MS-BioGraphs - MSA500}}, doi = {10.5281/zenodo.7820810}, url = {http://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA500}, howpublished= {\url{http://blogs.qub.ac.uk/DIPSA/MS-BioGraphs-MSA500}}}</pre> </td> </tr> </tbody> </table>