Skip to main content
zenodoopen

hiPSC 3D immunofluorescence images, tiny test set

<p>Example dataset of human induced pluripotent stem cells, imaged at 40x magnification with a Yokogawa CV7000. This is a tiny subset of a larger experiment intended as a test dataset for Fractal:&nbsp;https://github.com/fractal-analytics-platform/fractal</p> <p>It is a subset of this dataset:&nbsp;https://zenodo.org/record/7057076</p> <p>1 Channel&nbsp;is included:</p> <p>- C01: DAPI, nuclear stain</p> <p>&nbsp;</p> <p>This dataset also contains a small Fractal workflow for standard processing</p> <p>&nbsp;</p> <p>This dataset&nbsp;contains 2 Z levels for 2 field of views for this 1 channel, as well as (manually adjusted) metadata files from the Yokogawa CV7000.</p> <p>&nbsp;</p> <p>The data was acquired in the Pelkmans lab in August 2020. The images have been converted from TIFF into PNG (lossless).&nbsp;</p>

ShareScore

44/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
20
Reuse readiness
8
Engagement
4

Topics