A comparative benchmarking and evaluation framework for heterogeneous network-based drug repositioning methods

<p>This repository contains all the datasets used for benchmarking drug repositioning methods based on heterogeneous networks, including drug-drug similarity, disease-disease similarity, and drug-disease associations.</p> <p>The repository consists of:</p> <ol> <li>Name or keyword information for drugs and diseases information contained in the dataset</li> <li>Inputs needed for different drug repositioning methods: multiple drug similarity matrices,multiple disease similarity matrices, and drug-disease associations&nbsp;matrices.</li> </ol> <p>&nbsp;</p> <p>&nbsp;</p> <blockquote> <p><strong>Please cite us :</strong><br>Yinghong Li, Yinqi Yang, Zhuohao Tong, Yu Wang, Qin Mi, Mingze Bai, Guizhao Liang, Bo Li, Kunxian Shu, A comparative benchmarking and evaluation framework for heterogeneous network-based drug repositioning methods,&nbsp;<em>Briefings in Bioinformatics</em>, Volume 25, Issue 3, May 2024, bbae172,&nbsp;<a href="https://doi.org/10.1093/bib/bbae172">https://doi.org/10.1093/bib/bbae172</a></p> </blockquote>