Motif HOCOMOCO files preprocessed for DAStk
<p>Pre-scanned motif files HOCOMOCO_v11_p1e-6_grch38.tar.gz, HOCOMOCO_v11_p1e-6_hg19.tar.gz and HOCOMOCO_v11_p1e-6_mm10.tar.gz for the <code>GRCh38/hg38</code>, <code>hg19</code> and <code>mm10</code> reference genomes, respectively. These files are input files for DAStk (https://github.com/Dowell-Lab/DAStk) and have been generated from HOCOMOCO's v11 mononucleotide model, background-corrected for each reference genome, as described in the following paper:</p> <p><em>Kulakovskiy, I.V., Vorontsov, I.E., Yevshin, I.S., Sharipov, R.N., Fedorova, A.D., Rumynskiy, E.I., Medvedeva, Y.A., Magana-Mora, A., Bajic, V.B., Papatsenko, D.A., et al. (2018). <a href="https://academic.oup.com/nar/article/46/D1/D252/4616875">HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis</a>. Nucleic Acids Res 46, D252–D259.</em></p>
ShareScore
36/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 8
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 0
Dataset details
- Repository
- zenodo
- Published
- October 10, 2023
- License
- cc-by-4.0
- DOI
- 10.5281/zenodo.8432114
Scored with release 0.9.0
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