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Figures 10-14 from: Radek R, Wurzbacher C, Gisder S, Nilsson RH, Owerfeldt A, Genersch E, Kirk PM, Voigt K (2017) Morphologic and molecular data help adopting the insect-pathogenic nephridiophagids (Nephridiophagidae) among the early diverging fungal lineages, close to the Chytridiomycota. MycoKeys 25: 31-50. https://doi.org/10.3897/mycokeys.25.12446
Figures 10-14 Nephridiophaga blattellae, 10–13 transmission electron microscopy, 14 Calcofluor white staining. 10 Meront with several nuclei (n) and mitochondria (mi) in the lumen of Malpighian tubule. Inset: Mitochondrium with tubular to sac-like cristae. 11 Sporogenic plasmodium containing mature spores (sp), mitochondria (mi), and vegetative nuclei (n) in the cytoplasm. The plasmodium is anchored to the microvilli (mv) of epithelial cells (ep) of the tubule. 12 Young spore within the cytoplasm of a sporogenic plasmodium, surrounded by a layer of vesicles. The spore cytoplasm contains one nucleus (n), mitochondria (mi), and endoplasmic reticulum (er). 13 An infectious sporoplasm hatches through the central spore opening, leaving behind the spore wall of the emptying spore (sp). The nucleus (n) is squeezed through the tiny spore opening. 14 Calcofluor white stains the spore wall indicating the presence of chitin (bluish color). Scale bars: 1 µm (10–13), inset 0.1 µm (10), 5 µm (14).
Figures 10-11 from: Li T, Sheng M-L, Watanabe K, Guo Z-F (2017) Discovery of the genus Glyphicnemis Förster in the Oriental Region (Hymenoptera, Ichneumonidae, Cryptinae). ZooKeys 678: 129-137. https://doi.org/10.3897/zookeys.678.12397
Figures 10-11 - Glyphicnemis ganica sp. n. Holotype. Female. 10 Apical portion of hind tibia 11 Propodeum.
Figure 10 from: Hemp C, Heller K, Warchalowska-Sliwa E, Hemp A (2016) Spotted males, uniform females and the lowest chromosome number in Tettigoniids recorded: Review of the genus Gonatoxia Karsch (Orthoptera, Phaneropterinae). Deutsche Entomologische Zeitschrift 63(2): 271-286. https://doi.org/10.3897/dez.63.10799
Figure 10 - Gonatoxia nymphs. A. Gonatoxia maculata, last instar B. Gonatoxia immaculata 4th instar.
Figure 10 from: Gómez S, Díaz K (2017) On some new species of Ancorabolidae Sars, 1909 from the Gulf of California: the genera Ceratonotus Sars, 1909, and Dendropsyllus Conroy-Dalton, 2003 (Crustacea, Copepoda, Harpacticoida). ZooKeys 657: 43-65. https://doi.org/10.3897/zookeys.657.10725
Figure 10 - Dendropsyllus californiensis sp. n., female holotype. A P1, anterior B P2, anterior C P3, anterior, outer spine-like element of second endopodal segment indicated with an arrow D P4, anterior E P5, lateral, arrows showing tube pores.
Figure 10 from: Glover A, Dahlgren T, Taboada S, Paterson G, Wiklund H, Waeschenbach A, Cobley A, Martínez P, Kaiser S, Schnurr S, Khodami S, Raschka U, Kersken D, Stuckas H, Menot L, Bonifacio P, Vanreusel A, Macheriotou L, Cunha M, Hilário A, Rodrigues C, Colaço A, Ribeiro P, Błażewicz M, Gooday A, Jones D, Billett D, Goineau A, Amon D, Smith C, Patel T, McQuaid K, Spickermann R, Brager S (2016) The London Workshop on the Biogeography and Connectivity of the Clarion-Clipperton Zone. Research Ideas and Outcomes 2: e10528. https://doi.org/10.3897/rio.2.e10528
Figure 10 - The UK Seabed Resources Ltd (UKSRL) Abyssal Baseline (ABYSSLINE) survey area in the UK-1 exploration area in the eastern CCZ, with the UK-1 and Ocean Mineral Singapore (OMS) reserved areas highlighted. The survey design consists of replicated 30x30km boxes within the exploration area within which randomised sampling using a range of equipment is undertaken (Smith et al 2013). Image source: Craig R Smith, ABYSSLINE Project.
Figure 10 from: Wongkamhaeng K, Dumrongrojwattana P, Saengsakda Pattaratumrong MS (2016) Two new species of Floresorchestia (Crustacea, Amphipoda, Talitridae) in Thailand. ZooKeys 635: 31-51. https://doi.org/10.3897/zookeys.635.10454
Figure 10 - Floresorchestia buraphana sp. n. allotype, female 8.8 mm (PSUZC-CR-0313), Burapha University, Chonburi. Scale bars 0.5 mm.
Figure 10 from: Arimoto K (2017) Taxonomy of the Leptogenys modiglianii species group from southeast Asia (Hymenoptera, Formicidae, Ponerinae). ZooKeys 651: 79-106. https://doi.org/10.3897/zookeys.651.10336
Figure 10 - Leptogenys itoi sp. n., paratype, male. A head, full-face view B lateral view C petiole, lateral view D dorsal view E forewing F hindwing.
Figure 10 from: Shimomura M, Tomikawa K (2016) Epimeria abyssalis sp. n. from the Kuril-Kamchatka Trench (Crustacea, Amphipoda, Epimeriidae). ZooKeys 638: 125-142. https://doi.org/10.3897/zookeys.638.10329
Figure 10 - Epimeria abyssalis sp. n., paratype female (KMNH IvR 500907): A left pereopod 1, lateral B distal part of propodus and dactylus of left pereopod 1, lateral C left pereopod 2, lateral. Scale bars: 1 mm.
Figure 10 from: Chanabun R, Inkavilay K, Panha S (2017) New species of semi-aquatic freshwater earthworm genus Glyphidrilus Horst, 1889 from Thailand and Laos (Oligochaeta, Almidae). ZooKeys 672: 1-34. https://doi.org/10.3897/zookeys.672.10212
Figure 10 - Morphology of holotype (CUMZ 3424) of Glyphidrilus namdonensis sp. n. A external ventral view, annular clitellum in XX–XXXVII B internal dorsal view.
Figure 10 from: Tomikawa K, Nakano T, Sato A, Onodera S, Ohtaka A (2016) A molecular phylogeny of Pseudocrangonyx from Japan, including a new subterranean species (Crustacea, Amphipoda, Pseudocrangonyctidae). Zoosystematics and Evolution 92(2): 187-202. https://doi.org/10.3897/zse.92.10176
Figure 10 - Bayesian inference tree for 2,397 bp of nuclear 28S rRNA plus histone H3 and mitochondrial COI and 16S rRNA markers, with the map modified from Fig. 1. Numbers on nodes represent bootstrap values for maximum likelihood and Bayesian posterior probabilities. Specimen numbers are also shown in Fig. 1 and Table 1.
Figure 10 from: Tomikawa K, Nakano T, Hanzawa N (2017) Two new species of Jesogammarus from Japan (Crustacea, Amphipoda, Anisogammaridae), with comments on the validity of the subgenera Jesogammarus and Annanogammarus. Zoosystematics and Evolution 93(2): 189-210. https://doi.org/10.3897/zse.93.12125
Figure 10 - Jesogammarus uchiyamaryui sp. n., holotype, male (10.3 mm), NSMT-Cr 25474. A–C dorsal margins of pleonites 1–3, respectively, dorsal views; D–F epimeral plates 1–3, respectively, lateral views; G–I dorsal margins of urosomites 1–3, respectively, dorsal views; J peduncular articles 1–3, accessory flagellum, and flagellar articles 1–3 of antenna 1, medial view; K peduncular articles 1–5 and flagellar articles 1–3 of antenna 2, medial view; L calceolus of antenna 2, medial view; M upper lip, anterior view; N left mandible, medial view; O incisor and lacinia mobilis of left mandible, lateral view; P incisor and lacinia mobilis of right mandible, lateral view; Q lower lip, ventral view.
Figure 10 from: Heller K, Ingrisch S, Warchałowska-Śliwa E, Liu C (2017) The genus Ectadia (Orthoptera: Phaneropteridae: Phaneropterinae) in East Asia: description of a new species, comparison of its complex song and duetting behavior with that of E. fulva and notes on the biology of E. fulva. Journal of Orthoptera Research 26: 39-51. https://doi.org/10.3897/jor.26.14548
Figure 10 - Oscillograms of male calling songs, comparative overview. A. E diuturna sp. n., B. E fulva, In A, the different phases of one song unit are indicated.
Figure 10 from: Will K (2011) Taxonomic review of the Pterostichini and Loxandrini fauna of New Caledonia (Coleoptera, Carabidae). ZooKeys 147: 337-397. https://doi.org/10.3897/zookeys.147.1943
Figure 10 - Habitus images of A Prosopogmus lescheni B Pseudoceneus irideus, holotype C Pseudoceneus savesi, holotype.
Supplementary material 4 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887
The interactive Krona chart associated with Figure 2 :
Supplementary material 2 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887
The MIxS-BE annotations implemented for the built environment sequences during the workshop :
Figure 10 from: Korshunova T, Martynov A, Bakken T, Evertsen J, Fletcher K, Mudianta WI, Saito H, Lundin K, Schrödl M, Picton B (2017) Polyphyly of the traditional family Flabellinidae affects a major group of Nudibranchia: aeolidacean taxonomic reassessment with descriptions of several new families, genera, and species (Mollusca, Gastropoda). ZooKeys 717: 1-139. https://doi.org/10.3897/zookeys.717.21885
Figure 10 - Paracoryphella parva (Hadfield, 1963), comb. n. Holotype NHMD-91476, 2 mm length: A fixed animal, dorsal view B fixed animal, ventral view of anterior part C fixed animal, lateral view D rachidian radular teeth E lateral teeth F reproductive system. Abbreviations: a anus am ampulla fgm female gland mass fgo female genital opening nc continuous notal edge p penis pvd prostatic vas deferens r rhinophores rsd distal receptaculum seminis. Photos by A.V. Martynov. Drawings D, E, F from original description of P. parva from Hadfield (1963).
Figure 3 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887
Figure 3 Analysis of the MIxS-BE "building occupancy type" (type of building where the underlying sample was taken). The figure is based on Abarenkov et al. (2016) plus the data added during the workshop, such that it indicates the scientific state of ITS-based Sanger-derived sequencing of the built mycobiome as of spring 2017.
Figure 2 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887
Figure 2 Krona chart of the taxonomic affiliation of the built environment sequences down to order level. The Krona chart lists all annotated built environment sequences except those classified as Fungi sp. (32%) and those of non-fungal origin (1%). An interactive version of the Krona chart is provided as Supplementary material 4. The figure is based on Abarenkov et al. (2016) plus the data added during the workshop, such that it indicates the scientific state of ITS-based Sanger-derived sequencing of the built mycobiome as of spring 2017.
Figure 1 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887
Figure 1 Analysis of the built environment sequences for country of collection. Country centroids based on the geographical centres of contiguous country land masses are marked with bubbles of different size on the global map to indicate the number of built environment sequences originating from these countries as stated explicitly in the underlying INSDC records or as restored during the present effort and in Abarenkov et al. (2016) (57 distinct countries, sequence count ranging from 1 to 3,091). The figure is based on Abarenkov et al. (2016) plus the data added during the workshop, such that it indicates the scientific state of ITS-based Sanger-derived sequencing of the built mycobiome as of spring 2017.
Figures 10-13 from: Wang Y, Wang N, Yang D, Lin K (2024) The genus Platypalpus Macquart (Diptera, Hybotidae, Tachydromiinae) from Inner Mongolia, China, with the description of four new species. ZooKeys 1198: 87-99. https://doi.org/10.3897/zookeys.1198.114643
Figures 10-13 Platypalpus longus sp. nov., male 10 antenna 11 genitalia, dorsal view 12 right surstylus, lateral view 13 left epandrial lamella, lateral view. Scale bars: 0.2 mm.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.