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189 results for “DNA specimens”
Figure 1 from: Colgan DJ, Ahyong ST, Mardon K, Brereton IM (2021) Rare specimen identification in an un-integrated taxonomy: implications of DNA sequences from a Taiwanese Philine (Mollusca, Philinidae). ZooKeys 1060: 93-110. https://doi.org/10.3897/zookeys.1060.28809
Figure 1 C.559479, freshly caught animal (photograph Shane Ahyong). Scale bar: 10 mm.
Rapid DNA methylation-based classification of pediatric brain tumours from ultrasonic aspirate specimens
GEO Series GSE255044. Homo sapiens. 21 samples. Type: Methylation profiling by high throughput sequencing.
Integrated differential DNA methylation and gene expression of formalin-fixed paraffin-embedded uveal melanoma specimens identifies genes associated with early metastasis and poor prognosis
GEO Series GSE160645. Homo sapiens. 31 samples. Type: Methylation profiling by array; Expression profiling by array.
Clinical relevance of DNA microarray analyses using archival formalin-fixed paraffin-embedded breast cancer specimens
GEO Series GSE23386. Homo sapiens. 50 samples. Type: Expression profiling by array.
Fig. 2 ITS phylogeny and genetic distances from the 13 in DNA barcoding of brown Parmeliae (Parmeliaceae) species: a molecular approach for accurate specimen identification, emphasizing species in Greenland
Fig. 2 ITS phylogeny and genetic distances from the 13 brown Pakmeliae species occurring in Greenland. a Cartoon representation of the maximum likelihood ITS topology obtained from 372 brown Pakmeliae specimens. Values at each node indicate non-parametric bootstrap support; only support values>50% are shown (complete ITS topology is shown in Supplementary Figure, S1). b Box plots of ITS genetic distances estimated for each species and all interspecific distances. 'CO' =Cetkakiella commixta; 'AG' =Melaielia agiata; 'HE' = M. hepatizoi; 'ST' = M. stygia; 'EL' = Melaiohalea elegaitula; 'EX' = M. exaspekatula; 'IN' = M. iifumata; 'OL' =M. olivacea; 'SE' =M. septeitkioialis; 'DI' =Moitaielia disjuicta; 'PA' = M.
Fig. 1 in DNA barcoding of brown Parmeliae (Parmeliaceae) species: a molecular approach for accurate specimen identification, emphasizing species in Greenland
Fig. 1 Brown Pakmeliae species occurring in Greenland. a – d Cetrarioid clade: a Cetkakiella commixta; b Melaielia agiata; c Melaielia hepatizoi; d Melaielia stygia. e – h The genus Melaiohalea: e Melaiohalea elegaitula; f Melaiohalea exaspekatula; g Melaiohalea iifumata; h Melaiohalea olivacea. i – l The genus Moitaielia: i
FIGURE 4 in Non-invasive ancient DNA protocol for fluid-preserved specimens and phylogenetic systematics of the genus Orestias (Teleostei: Cyprinodontidae)
FIGURE 4. Molecular phylogeny of Orestias complexes including 'fresh' species and morphotype ("morpho") representatives, and type specimens. Maximum clade credibility tree for control region sequences. Values at branch nodes refer to highest posterior probability of occurrence for clades (> 0.95). Scale bar below tree indicates sequence divergence. Scale bar on pictures represents 2 cm. Type specimens are highlighted with an asterisk. See Table 2 for specimen acronyms. See Discussion for attribution of complex names.
FIGURES 6–10 in Recovery of mitochondrial DNA for systematic studies of Pentatomoidea (Hemiptera: Heteroptera): successful PCR on early 20 century dry museum specimens
FIGURES 6–10. Trace files (electropherograms) showing the same fragment (between 120bp and 230bp) of the subunit 12S. 6–9, Dinidoridae: Coridius nepalensis (6), Cyclopelta obscura (7), Megymenum brevicorne (8), M. parallelum (9); 10, Tessaratomidae: Tessaratoma quadrata.
DNA methylation arrays for 8 Surgical specimens (DNA extracted from FFPE slides) after cetuximab treatment
GEO Series GSE110995. Homo sapiens. 8 samples. Type: Methylation profiling by genome tiling array.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.