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903 results for “Domestication”
Massive Chinese domestic pigs provide missing sequences in reference genome and reveal non-coding sequence variations regulating gene expression across Eurasian boars
<p>This dataset contains novel sequences in Chinese domestic pigs but is absent in Sscrofa 11.1 reference genome. The detailed information for each file is recorded in the README file.</p>
Figure 1 in Species composition of hard ticks (Acari: Ixodidae) on domestic animals and their public health importance in Tamil Nadu, South India
Figure 1. Localities where the field work was carried out in Madurai district.
Domestication shapes the pig gut microbiome and immune traits from the scale of lineage to population
<p><span>Animal ecology and evolution have long been known to shape host physiology, but more recently, the gut microbiome has been identified as a mediator between animal ecology and evolution and health</span><span>. The gut microbiome has been shown to differ between wild and domestic animals, but the role of these differences for domestic animal evolution remains unknown. </span><span>Gut microbiome responses to new animal genotypes and local environmental change during domestication may promote specific host phenotypes that are adaptive (or not) to the domestic environment. Because the gut microbiome supports host immune function, understanding the effects of animal ecology and evolution on the gut microbiome and immune phenotypes is </span><span>critical. </span><span>We investigated how domestication affects the gut microbiome and host immune state in multiple pig populations across five domestication contexts representing domestication status and current living conditions: free-ranging wild, captive wild, free-ranging domestic, captive domestic in research or industrial settings. We observed that domestication context explained much of the variation in gut microbiome composition, pathogen abundances, and immune markers, yet the main differences in the repertoire of metabolic genes found in the gut microbiome were between the wild and domestic genetic lineages. We also documented population-level effects within domestication contexts, demonstrating that fine scale environmental variation also shaped host and microbe features. Our findings highlight that understanding </span><span>which gut microbiome and immune traits respond to host genetic lineage and/or scales of local ecology could inform </span><span>targeted interventions that manipulate the gut microbiome to achieve beneficial health outcomes. </span></p>
Reconciling chemical flame retardant exposure and fire risk in domestic furniture: supplemental materials
<p>Materials necessary for the replication and development of methods for modelling fire risk and chemical flame retardant exposure as described in the manuscript. [Manuscript in review, link to be added when available.]</p>
Estimation of non-health Gross Domestic Product (NHGDP) loss due to COVID-19 deaths in West Bengal, India
<p>This study estimates the economic losses (GDP), particularly the impact of COVID-19 deaths on non-health components of GDP in West Bengal state. The NHGDP losses were evaluated using cost-of-illness approach. Future NHGDP losses were discounted at 3%. Excess death estimates by the World Health Organisation (WHO) and Global Burden of Disease (GBD) were used. Sensitivity analysis was carried out by varying discount rates and Average Age of Death (AAD).</p> <p>21,532 deaths in West Bengal since 17th March 2020 till 31st December 2022 decreased the future NHGDP by $0.92 billion. Nearly 90% of loss was due to deaths occurring in above 30 years age-group. The majority of the loss was borne among the 46–60 years age-group. The NHGDP loss/death was $42,646, however, the average loss/death declined with a rise in age. The loss increased to $9.38 billion and $9.42 billion respectively based on GBD and WHO excess death estimates. The loss increased to $1.3 billion by considering the lower age of the interval as AAD. At 5% and 10% discount rates, the losses reduced to $0.769 billion and $0.549 billion respectively.</p> <p>Results from the study suggest that COVID-19 contributed to major economic loss in West Bengal. The mortality and morbidity caused by COVID-19, the substantial economic costs at individual and population levels in West Bengal, and probably across India and other countries, is another argument for better infection control strategies across the globe to end the impact of this epidemic.</p>
Domesticated Dog, Modoc Rockshelter, Cranium
"Dog 2" from Archaic levels of Modoc Rockshelter, Randolph Co., IL Source: Objaverse 1.0 / Sketchfab
Evolution of SSR diversity from wild types to U.S. advanced cultivars in the Andean and Mesoamerican domestications of common bean (Phaseolus vulgaris)
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More people, more cats, more parasites: Human population density and temperature variation predict the prevalence of Toxoplasma gondii oocyst shedding in free-ranging domestic and wild felids
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Interacting effects of surface water and temperature on wild and domestic large herbivore aggregations and contact rates
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Data from: Molecular mapping and identification of quantitative trait loci for domestication traits in field cress (Lepidium campestre L.) genome
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Data from: The laboratory domestication of zebrafish: from diverse populations to inbred substrains
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Cooperative communication with humans evolved to emerge early in domestic dogs
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Data from: Complex disease and phenotype mapping in the domestic dog
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Data from: Maintenance and expansion of genetic and trait variation following domestication in a clonal crop: Enset tGBS individual genotype data
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Enhancing crop domestication through genomic selection, a case study of intermediate wheatgrass
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Amplicon sequence variants (ASV) of gut pathogens in hooded cranes and domestic geese
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A machine learning enabled approach to assess trade-offs between growth and stress tolerance in Pooideae grasses following domestication
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Low levels of hybridization between domestic and wild Mallards wintering in the Lower Mississippi Flyway
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Domestication phenotype linked to vocal behavior in marmoset monkeys
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Data from: Does the genomic landscape of species divergence in Phaseolus beans coerce parallel signatures of adaptation and domestication?
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.