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199
datasets available to search
ShareScore release 0.9.0
Dataset results
199 results for “Genome references”
Characterization of a strain-specific Cd1 reference genome reveals potential inter- and intra-strain functional variability
GEO Series GSE209816. Mus musculus. 9 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Genome variation profiling by high throughput sequencing.
ChIP-Seq with reference exogenous genome (ChIP-Rx) of MAX in U2OS-MYC-KO-MYC-Tet-On cells with exogenous wild-type and mutant MYC expression
GEO Series GSE273776. Homo sapiens. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Characterization of a strain-specific Cd1 reference genome reveals potential inter- and intra-strain functional variability [ATAC-seq]
GEO Series GSE209810. Mus musculus. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genomic Library Enrichment for n-Butanol tolerance in E. coli. Samples vs Reference
GEO Series GSE26223. Escherichia coli. 16 samples. Type: Expression profiling by array.
Comparative genomic analysis of 93 Bp strains using K96243 as the reference
GEO Series GSE9491. Burkholderia pseudomallei; Burkholderia pseudomallei K96243. 93 samples. Type: Genome variation profiling by array.
BovReg_eQTL reference genome
<p>Reference genome for test run of Bovreg eQTL pipeline</p>
Chromosome-level reference genome of tetraploid Isoetes sinensis provides insights into evolution and adaption of lycophytes
GEO Series GSE198193. Isoetes sinensis. 1 samples. Type: Other.
Genomic hybridization of several Actinobacillus pleuropneumoniae serotypes' reference strains compared to strain JL03
GEO Series GSE13629. Actinobacillus pleuropneumoniae. 14 samples. Type: Genome variation profiling by genome tiling array.
scRNA-seq and genomic reference of PBMC upon TNF Inhibitor Response in Ankylosing Spondylitis
GEO Series GSE277117. Homo sapiens. 62 samples. Type: Expression profiling by high throughput sequencing; Other.
scRNA-seq and genomic reference of PBMC upon TNF Inhibitor Response in Ankylosing Spondylitis
GEO Series GSE277791. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
A high-quality chromosomal-level reference genome of Dendrobium nobile L. provides new insights into the biosynthesis and accumulation of picrotoxane-type sesquiterpenoid alkaloids
GEO Series GSE254169. Dendrobium nobile. 12 samples. Type: Expression profiling by high throughput sequencing.
ExplorATE test data: a pipeline to explore active transposable elements from RNAseq data without a reference genome
GEO Series GSE173261. Liolaemus parthenos. 3 samples. Type: Expression profiling by high throughput sequencing.
De novo assembled individual genome does not show advantage against standard reference genome: a demonstration of Chinese Han Population
GEO Series GSE121013. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide selection and testing of superior reference genes for quantitative gene expression normalization in tobacco (Nicotiana tabacum)
GEO Series GSE73440. Nicotiana tabacum. 21 samples. Type: Expression profiling by array.
THP-1 cell lines: reference data for classification of THP-1 cells [genome]
GEO Series GSE178731. Homo sapiens. 4 samples. Type: Genome variation profiling by SNP array.
Circadian regulation of transcriptome in spinach leaves under varying nitrogen levels (aligned to Sp75 reference genome)
GEO Series GSE275461. Spinacia oleracea. 24 samples. Type: Expression profiling by high throughput sequencing.
The non-reference sequence data and the gene annotation information of chicken linear pan-genome
Open the record for dataset details and reuse information.
Multiple sequence alignments of Treponema pallidum complete genomes using three different references for mapping NGS reads
<p>Each file corresponds to the multiple sequence alignment of 75 complete Treponema pallidum genome sequences using the genomes of strains Nichols, SS14, and CDC-2 as references for mapping. This is supplemental data to the manuscript "Evolutionary processes in the emergence and recent spread of <em>Treponema pallidum</em>, the causative agent of syphilis" by Marta Pla-Díaz, Leonor Sánchez-Busó, Lorenzo Giacani, David Šmajs, Philipp P. Bosshard, Homayoun C. Bagheri, Verena J. Schuenemann, Kay Nieselt, Natasha Arora and Fernando González-Candelas</p>
Intersectional files taking each of the original 12 annotation candidates as the reference genome
<p>Intersectional files taking each of the original 12 annotation candidates as the reference genome</p>
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.