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233
datasets available to search
ShareScore release 0.9.0
Dataset results
233 results for “Long-reads”
A bioinformatic pipeline for analysis of M.EcoGII methylation footprint PacBio long-read sequence data
GEO Series GSE243114. Saccharomyces cerevisiae; Escherichia coli. 12 samples. Type: Other.
Long-read sequencing of nascent RNA in S. pombe reveals coupling among RNA processing events
GEO Series GSE104681. Schizosaccharomyces pombe. 18 samples. Type: Expression profiling by high throughput sequencing; Other.
Set5: HCC single-cell Loop-seq long-read RNA-seq by Element Biosciences AVITI platform
GEO Series GSE246836. Homo sapiens. 8 samples. Type: Other.
Third-generation long-read whole-genome sequencing of Dux knockout mouse
GEO Series GSE134830. Mus musculus. 1 samples. Type: Other.
High resolution and allelic-specific annotation of preimplantation embryo transcriptome using long-read sequencing
GEO Series GSE138760. Mus musculus. 21 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of testis and epididymis tissues from Banna mini-pig inbred line (BMI) boars with single-molecule long-read sequencing
GEO Series GSE193976. Sus scrofa. 12 samples. Type: Expression profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing.
Long-Read Sequencing of an Advanced Cancer Cohort Resolves Rearrangements, Unravels Haplotypes, and Reveals Methylation Landscapes
GEO Series GSE270257. Homo sapiens. 232 samples. Type: Methylation profiling by high throughput sequencing.
Long-read nanopore sequencing (Nanopore-seq) of PQBP1 knockdown in ovarian cancer cells
GEO Series GSE223088. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
scNanoATAC-seq: Long-read Single-cell ATAC-seq by Oxford Nanopore Technologies Sequencing [DataSet1: scNanoATAC-seq]
GEO Series GSE194022. Mus musculus; Homo sapiens. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Long-read sequencing of CLL and MDS patients uncovers molecular effects of SF3B1 mutations in cancer (SF3B1 & U2AF2 iCLIP)
GEO Series GSE247658. Homo sapiens. 9 samples. Type: Other.
Single-molecule long-read sequencing reveals a conserved intact long RNA profile in sperm
GEO Series GSE137490. Homo sapiens; Mus musculus. 15 samples. Type: Expression profiling by high throughput sequencing.
Long-read RNA-seq(Iso-seq) analysis of HBV-KMT2B integrated HPCs in which HBV genome is integrated into KMT2B region.
GEO Series GSE244522. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Identification of a novel transcriptional variant in the mouse Sry locus by long-read RNA-seq and conventional RNA-seq
GEO Series GSE151472. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Protocol for Mapping Protein-DNA Interactions with Directed Methylation with Long-read Sequecing (DiMeLo-seq)
GEO Series GSE208125. Homo sapiens; Drosophila melanogaster. 4 samples. Type: Other.
scNanoATAC-seq: Long-read Single-cell ATAC-seq by Oxford Nanopore Technologies Sequencing [DATASet2: bulkATAC-seq]
GEO Series GSE194023. Mus musculus; Homo sapiens. 10 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
PacBio long-read RNA-sequencing to identify differentially expressed genes and repetitive elements between Wild Type RBM4 KO HAP1 cell line samples
GEO Series GSE147896. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
A long-read RNA-seq approach to identify novel transcripts of very large genes
GEO Series GSE138362. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Illumina short-read and PacBio long-reads of rRNA-depleted RNA from WT S. mediterranea across multiple regeneration time points
GEO Series GSE294569. Schmidtea mediterranea. 4 samples. Type: Expression profiling by high throughput sequencing.
High-throughput manual-quality annotation of full-length long noncoding RNAs with Capture Long-Read Sequencing (CLS)
GEO Series GSE93848. Mus musculus; Homo sapiens. 36 samples. Type: Non-coding RNA profiling by high throughput sequencing.
Long-read RNA-Seq analysis of the full-length F8 transcript in iPSCs
GEO Series GSE229621. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing; Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.