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468
datasets available to search
ShareScore release 0.9.0
Dataset results
468 results for “chromatin binding”
Chromatin binding profiles of the APC tumor suppressor and changes in gene expression following APC silencing
GEO Series GSE99264. Homo sapiens. 7 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
Differential chromatin binding of the lung lineage transcription factor NKX2-1 resolves opposing murine alveolar cell fates in vivo [scATAC-Seq]
GEO Series GSE158196. Mus musculus. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Widespread RNA Binding by Chromatin Associated Proteins
GEO Series GSE67963. Homo sapiens. 79 samples. Type: Expression profiling by high throughput sequencing; Other; Non-coding RNA profiling by high throughput sequencing.
SATB1 Regulates 3D Genome Architecture in T cells by Constraining Chromatin Interactions surrounding CTCF-binding sites
GEO Series GSE199006. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
ZNF512B binds RBBP4 via a variant NuRD interaction motif and aggregates chromatin in a NuRD complex-independent manner
GEO Series GSE236639. Homo sapiens. 13 samples. Type: Expression profiling by high throughput sequencing.
Methylation specifies distinct estrogen-induced binding site repertoires of CBP to chromatin
GEO Series GSE32350. Homo sapiens. 23 samples. Type: Expression profiling by array; Genome binding/occupancy profiling by high throughput sequencing.
The chromatin-binding protein PHF6 functions as an E3 ubiquitin ligase of H2BK120 via H2BK12Ac recognition for activation of trophectodermal genes
GEO Series GSE144298. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Different Chromatin and DNA Sequence Characteristics Define Glucocorticoid Receptor Binding Sites that are Blocked or Not Blocked by Coregulator Hic-5 [ChIP-seq]
GEO Series GSE109383. Homo sapiens. 18 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Distinct roles for motif affinity, chromatin state, and co-regulatory motifs in PPARγ binding and enhancer activity
GEO Series GSE84888. synthetic construct; Mus musculus. 21 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
HNF4A defines tissue-specific circadian rhythms by beaconing BMAL1::CLOCK chromatin binding and shaping rhythmic chromatin landscape
GEO Series GSE157452. Mus musculus; Homo sapiens. 83 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Inherent DNA binding specificities of the HIF-1α and HIF-2α transcription factors in chromatin (RNA-seq)
GEO Series GSE120886. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.
Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-based Regulation of Transcription
GEO Series GSE120110. Homo sapiens. 152 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
A study of the effect of OxLDL on C/EBP beta binding in human macrophages using chromatin immunoprecipitation for C/EBP beta with high throughput sequencing (ChIP-seq)
GEO Series GSE66192. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
KSHV chromatin looping facilitates effective gene expression: high-resolution mapping of K-Rta binding sites in the KSHV genome [ChIP-seq]
GEO Series GSE99943. Homo sapiens. 2 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
MYC overexpression leads to increased chromatin interactions at superenhancers and MYC binding sites
GEO Series GSE164777. Mus musculus; Homo sapiens. 28 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Capture-C reveals preformed chromatin interactions between HIF-binding sites and distant promoters.
GEO Series GSE78114. Homo sapiens. 34 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-Cell RNA-seq Uncovers Dynamic Processes Orchestrated by RNA-Binding Protein DDX43 in Chromatin Remodeling during Spermiogenesis
<p>All datasets include analyzed scRNA-seq, peak files called from eCLIP-seq datasets, and spliced/unspliced readouts of single cell.</p>
Methyl-CpG-binding domain 9 (MBD9) is required for H2A.Z incorporation into chromatin at a subset of H2A.Z-enriched regions in the Arabidopsis genome
GEO Series GSE117391. Arabidopsis thaliana. 21 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Genome-wide maps of histone modification and chromatin remodeler binding in acute myeloid leukemia blast cells and normal hematopoietic cells
GEO Series GSE108976. Homo sapiens. 24 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Multivalent binding of PWWP2A to H2A.Z-marked transcriptional active chromatin regulates mitosis and organ development [RNA-seq]
GEO Series GSE78003. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.