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314
datasets available to search
ShareScore release 0.7.1
Dataset results
314 results for “genome architecture”
Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories (Rapeseed_Hi-C)
GEO Series GSE133881. Brassica napus. 1 samples. Type: Other.
Three-dimensional modeling of the P. falciparum genome during the erythrocytic cycle reveals a strong connection between genome architecture and gene expression
GEO Series GSE50199. Plasmodium falciparum 3D7. 4 samples. Type: Other.
DNA methylation maintains integrity of higher order genome architecture (Hi-C)
GEO Series GSE158007. Homo sapiens. 6 samples. Type: Other.
Three-dimensional genome architectural CCCTC-binding factor makes choice in duplicated enhancers at Pcdhα locus. [ChIP-seq II]
GEO Series GSE147279. Homo sapiens. 11 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
MYOD Remodeling of the Genome Architecture during Myogenic Conversion of Somatic Cells
GEO Series GSE98509. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Third-party reanalysis; Other.
Genome-wide prediction of topoisomerase IIB binding by architectural factors and chromatin accessibility
GEO Series GSE141528. Homo sapiens. 3 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Longitudinal Genome Wide Analysis of Chronic Lymphocytic Leukemia Reveals Complex Evolution of Clonal Architecture at Disease Progression and at the Time of Relapse
GEO Series GSE30217. Homo sapiens. 54 samples. Type: Genome variation profiling by genome tiling array.
Evolution of genome architecture in Archaea: spontaneous generation of a new chromosome in Haloferax volcanii by homologous recombination
GEO Series GSE108201. Haloferax volcanii. 4 samples. Type: Other.
Structure-first identification of RNA elements that regulate dengue virus genome architecture and replication
GEO Series GSE226865. dengue virus type 1; dengue virus type 3; dengue virus type 2; dengue virus type 4. 12 samples. Type: Other.
Comparative genomic analyses of the human NPHP1 locus reveal complex genomic architecture and its regional evolution in primates
GEO Series GSE73962. Papio anubis; Macaca mulatta; Gorilla gorilla; Pongo abelii; Homo sapiens; Pan troglodytes. 32 samples. Type: Genome variation profiling by genome tiling array.
3D genome architecture of Zynoseptoria tritici IPO323
GEO Series GSE296663. Zymoseptoria tritici. 2 samples. Type: Other.
High-resolution mapping of regulatory element interactions and genome architecture using ARC-C [ARC-C]
GEO Series GSE144670. Caenorhabditis elegans. 3 samples. Type: Other.
Integrative analysis of the genomic architecture of a complex kidney damage QTL in inbred hypertensive rats implies Tmem63c for translational research
GEO Series GSE102546. Rattus norvegicus. 6 samples. Type: Expression profiling by high throughput sequencing.
HiChIP: Efficient and sensitive analysis of protein-directed genome architecture
GEO Series GSE80820. Homo sapiens; Mus musculus. 18 samples. Type: Other.
Chromatin architecture reorganisation during neuronal cell differentiation in Drosophila genome
GEO Series GSE122603. Drosophila melanogaster. 4 samples. Type: Other.
Comparative 3D Genome Architecture in Vertebrates (Hi-C)
GEO Series GSE167579. Homo sapiens; Mus musculus; Danio rerio; Gallus gallus; Macaca mulatta; Felis catus; Bos taurus; Ovis aries; Oryctolagus cuniculus; Rattus norvegicus; Canis lupus familiaris. 25 samples. Type: Other.
Analysis of genome architecture during SCNT reveals a role of cohesin in impeding minor ZGA
GEO Series GSE139430. Mus musculus. 75 samples. Type: Expression profiling by high throughput sequencing; Other; Genome binding/occupancy profiling by high throughput sequencing.
Polycomb-mediated genome architecture enables long-range spreading of H3K27 methylation [Cut&Tag]
GEO Series GSE150905. Mus musculus. 14 samples. Type: Other.
Stage-resolved genome architecture maps throughout meiotic prophase link regional variations in chromosome organization with homolog alignment (Hi-C, Cut&Tag, RNA-seq)
GEO Series GSE155967. Mus musculus. 22 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing.
PAXIP1 and STAG2 converge to maintain 3D genome architecture and facilitate promoter/enhancer contacts to enable stress hormone-dependent transcription [RNA-seq]
GEO Series GSE221916. Homo sapiens. 36 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.