Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
371
datasets available to search
ShareScore release 0.9.0
Dataset results
371 results for “single cell genomics”
A Novel platform for single-cell RNA-sequencing and its application in genome medicine
GEO Series GSE179211. Homo sapiens. 28 samples. Type: Expression profiling by high throughput sequencing.
FixNCut: Single-cell genomics through reversible tissue fixation and dissociation
GEO Series GSE229944. Homo sapiens; Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Single-cell transcriptome and 3D genome atlas of the developing mouse brain
GEO Series GSE162511. Homo sapiens; Mus musculus. 4314 samples. Type: Expression profiling by high throughput sequencing; Other.
Discordant genome assemblies drastically alter the interpretation of single cell RNA sequencing data which can be mitigated by a novel integration method
GEO Series GSE194093. Astyanax mexicanus. 1 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNA-seq (10X Genomics Chromium) of MGE, CGE, cortical and subcortical regions of E13.5, E18.5 and P10 mice
GEO Series GSE104156. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
A Novel platform for single-cell RNA-sequencing and its application in genome medicine [cellenone]
GEO Series GSE179205. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Selective single cell isolation for genomics using microraft arrays
GEO Series GSE85183. Homo sapiens. 120 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNAsequencing of the ventral rhombomere 1 of the developing mouse [10X Genomics]
GEO Series GSE157963. Mus musculus. 7 samples. Type: Expression profiling by high throughput sequencing.
A Novel platform for single-cell RNA-sequencing and its application in genome medicine [icell8]
GEO Series GSE179204. Homo sapiens. 3 samples. Type: Expression profiling by high throughput sequencing.
Single-Cell Transcriptomics of Genome-Edited Kidney Organoids
GEO Series GSE135663. Homo sapiens. 16 samples. Type: Expression profiling by high throughput sequencing.
A spatially resolved single cell genomic atlas of the adult human breast
GEO Series GSE195665. Homo sapiens. 201 samples. Type: Expression profiling by high throughput sequencing.
Highly Parallel Genome-Wide Expression Analysis of Single Mammalian Cells (Optimization)
GEO Series GSE34364. Homo sapiens. 11 samples. Type: Expression profiling by array.
Genome-wide maps of nuclear lamina interactions in single human cells (CEL-seq)
GEO Series GSE68596. Homo sapiens. 1 samples. Type: Expression profiling by high throughput sequencing.
Structural and functional properties of mSWI/SNF chromatin remodeling complexes revealed through single-cell perturbation and genomic profiling
GEO Series GSE200201. Homo sapiens. 38 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Single-cell lineage capture across genomic modalities with CellTag-multi reveals fate-specific gene regulatory changes [scATAC-seq - iEP].
GEO Series GSE217119. Mus musculus. 29 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell three dimensional genome structures of rice egg, sperm, and unicellular zygote
GEO Series GSE123109. Oryza sativa Japonica Group. 15 samples. Type: Other.
Identifying Multiple Genomic Abnormalities and Predicting Neoantigens from Single Tumor Cells [PRJNA1110293]
GEO Series GSE267871. Mus musculus. 27 samples. Type: Other.
Whole-genome single-cell 5mC sequencing of human primordial germ cell-like cells
GEO Series GSE138982. Homo sapiens. 2 samples. Type: Methylation profiling by high throughput sequencing.
Highly Parallel Genome-Wide Expression Analysis of Single Mammalian Cells (Performance Metrics)
GEO Series GSE34363. Homo sapiens. 33 samples. Type: Expression profiling by array.
Single-cell transcriptomic analysis of blood T cells from healthy controls, MS patients and COVID-19 patients by 10X genomics
GEO Series GSE193770. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.