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193
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ShareScore release 0.9.0
Dataset results
193 results for “trait analysis”
DEFINING A RAT BLOOD PRESSURE QUANTITATIVE TRAIT LOCUS TO A <81.8KB CONGENIC SEGMENT: COMPREHENSIVE SEQUENCING AND RENAL TRANSCRIPTOME ANALYSIS.
GEO Series GSE22515. Rattus norvegicus. 6 samples. Type: Expression profiling by array.
Genetic Analysis of Human Traits In-Vitro: Drug Response and Gene Expression in Lymphoblastoid Cell Lines
GEO Series GSE11582. Homo sapiens; Pan troglodytes. 374 samples. Type: Expression profiling by array.
Functional genomic and transcriptomic analysis of amphioxus and the origin of vertebrate genomic traits [4C-seq]
GEO Series GSE115945. Danio rerio. 83 samples. Type: Other.
Bulk RNAseq analysis reveals distinct differentiation traits of COMMD10-deficient Ly6Chi monocytes in the injured liver
GEO Series GSE183494. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
Physiological traits assessment and RNAseq data analysis revealed a high vulnerability of Setaria viridis to salt compared to its close relative Spartina alterniflora
GEO Series GSE146718. Sporobolus alterniflorus; Setaria viridis. 12 samples. Type: Expression profiling by high throughput sequencing.
Validation studies and multi-omics analysis of Zhx2 as a candidate quantitative trait gene underlying brain oxycodone metabolite (oxymorphone) levels and behavior
GEO Series GSE275965. Mus musculus. 16 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide expression quantitative trait loci (eQTL) analysis in maize
GEO Series GSE29964. Zea mays. 248 samples. Type: Expression profiling by array.
RNA-Seq Analysis of transcriptome network effects of dual-trait selection for ethanol preference and withdrawal using SOT and NOT genetic models
GEO Series GSE140567. Mus musculus. 84 samples. Type: Expression profiling by high throughput sequencing.
Cell and state-specific eQTL analysis in human endometrial mesenchymal cells uncovers candidate susceptibility genes for reproductive diseases and traits
GEO Series GSE251756. Homo sapiens. 59 samples. Type: Expression profiling by high throughput sequencing.
Supplementary tables of Causal relationship between gut microbiota, blood metabolites, immune cell traits, inflammatory proteins, and cataract: a two-sample, bidirectional mendelian randomization analysis
<p><span>Table S1: The information of GWAS data for gut microbiota; Table S2: The information of GWAS data for blood metabolites and metabolite ratios; Table S3: The information of GWAS data for immune cell traits; Table S4: The information of GWAS data for circulating inflammatory proteins; Table S5: The results of casual effects and sensitive analysis of identified gut microbiota on cataract; Table S6: The results of casual effects and sensitive analysis of identified blood metabolites and metabolite ratios on cataract; Table S7: The results of casual effects and sensitive analysis of identified immune cell traits on cataract; Table S8: The results of casual effects and sensitive analysis of identified circulating inflammatory proteins on cataract; Table S9: The significant casual effects of two-sample MR analysis in mediation analysis; Table S10: The consistent effect sizes of exposure-outcome, exposure-mediator, and mediator-outcome; Table S11: The results of preliminary MVMR in mediation analysis; Table S12: The results of subsequent MVMR in mediation analysis; Table S13: The results of significant casual effects of cataract on gut microbiota, blood metabolites and metabolite ratios, and circulating inflammatory proteins; Table S14: The genes identified from the causal SNPs using MAGMA; Table S15: The results of functional enrichment analysis of the genes identified from the causal SNPs.</span></p>
Genomic analysis of 1,325 Camellia accessions sheds light on agronomic and metabolic traits for tea plant improvement
<p>Leaf shape traits and metabolomic traits data for GWAS analysis</p>
Date from: Global analysis of trait-trait relationships within and between species
<ul> <li>Some robust trait-trait relationships between species, including the leaf economic spectrum (LES), are regarded as important plant strategies but whether these relationships truly represent plant strategies remains unclear.</li> <li>We propose a novel approach to distinguish trait-trait relationships between species that may represent plant strategies <em>vs. </em>those relationships that are due to common drivers, by comparing the direction and strength of intraspecific trait variation (ITV) <em>vs</em>. interspecific trait variation. We applied this framework using a unique global ITV database we compiled, which included eleven traits related to LES, size and roots, and observations from 2064 species occurring in 1068 communities across 19 countries.</li> <li>Generally, compared to between species, trait-trait relationships within species were much weaker or totally disappeared. Almost only within the LES traits, the between-species trait-trait relationships were translated into positive relationships within-species, which suggests they may represent plant strategies.</li> <li>Moreover, the frequent coincidental trait-trait relationships between species, driven by co-varying common drivers, imply that in future research, decoupling of trait-trait relationships should be seriously considered in model projections of ecosystem functioning. Our study emphasises the importance of describing the mechanisms behind trait-trait relationships, both between and within species, to deepen our understanding of general plant strategies.</li> </ul>
Identification of clinical trait–related small RNA biomarkers with weighted gene co-expression network analysis for personalized medicine in endocervical adenocarcinoma
GEO Series GSE176579. Homo sapiens. 14 samples. Type: Non-coding RNA profiling by high throughput sequencing.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.