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Fig. 14 in Revision, Phylogenetic, Biogeographic, And Host Analyses Of The Endemic Western North American Phymatopsallus Group, With The Description Of 9 New Genera And 15 New Species (Insecta: Hemiptera: Miridae: Phylinae)
Fig. 14. Ceratopsallus aquilonius: Male genitalia (AMNH_PBI 00071636).
Map 4 in Revision, Phylogenetic, Biogeographic, And Host Analyses Of The Endemic Western North American Phymatopsallus Group, With The Description Of 9 New Genera And 15 New Species (Insecta: Hemiptera: Miridae: Phylinae)
Map 4. Distribution of Ceratopsallus quercicola–C. vauqueliniae.
Map 2 in Revision, Phylogenetic, Biogeographic, And Host Analyses Of The Endemic Western North American Phymatopsallus Group, With The Description Of 9 New Genera And 15 New Species (Insecta: Hemiptera: Miridae: Phylinae)
Map 2. Distribution of Bisulcopsallus spp.
Fig. 7 in Revision, Phylogenetic, Biogeographic, And Host Analyses Of The Endemic Western North American Phymatopsallus Group, With The Description Of 9 New Genera And 15 New Species (Insecta: Hemiptera: Miridae: Phylinae)
Fig. 7. Bisulcopsallus fulvipunctatus: Male genitalia (AMNH_PBI 00068495; entire vesica drawn at
Map 1 in Revision, Phylogenetic, Biogeographic, And Host Analyses Of The Endemic Western North American Phymatopsallus Group, With The Description Of 9 New Genera And 15 New Species (Insecta: Hemiptera: Miridae: Phylinae)
Map 1. Distribution of Angelopsallus and Arizonapsallus spp.
Host-specificity in Scelionid parasitoids: Arrestment, competition, and egg electrophysiology results
<p>This archive contains the raw data from a series of experiments with Trissolcus basalis and Trissolcus oenone to better understand the chemical basis mediating differences in host-specificity between these parasitoids. First, we compared the searching behaviour of T. basalis and T. oenone in open arena arrestment bioassays contaminated with footprint compounds from Nezara viridula and Cuspicona simplex. Trissolcus basalis spent four times longer searching for N. viridula than C. simplex, while T. oenone spent four times longer searching for C. simplex than N. viridula. We then conducted competition experiments to assess factors important to determining the outcomes of extrinsic and intrinsic contests between these parasitoids when they are simultaneously exposed to C. simplex egg masses. Trissolcus oenone, was the superior competitor in extrinsic and intrinsic contests. Finally, we recorded the antennal responses of T. basalis to egg extracts of N. viridula to tentatively identify potential contact kairomones used by this parasitoid to recognise and accept hosts.</p>
A cohort-based study of host gene expression: tumor suppressor and innate immune/inflammatory pathways associated with the HIV reservoir size
<p>The major barrier to an HIV cure is the HIV reservoir: latently-infected cells that persist despite effective antiretroviral therapy (ART). Most prior studies of host genetic predictors of HIV control have focused on "elite controllers," rare individuals able to control virus in the absence of ART. However, there have been few genetic studies among ART-suppressed non-controllers, who make up the majority of people living with HIV (PLWH). We performed host RNA sequencing and HIV reservoir quantification (total DNA [tDNA], unspliced RNA [usRNA], intact DNA) from peripheral CD4+ T cells from 191 HIV+ ART-suppressed non-controllers. After adjusting for nadir CD4+ count, timing of ART initiation, and genetic ancestry, we identified two host genes for which higher expression was significantly associated with smaller total DNA viral reservoir size, <em>P3H3</em> and <em>NBL1</em>, both known tumor suppressor genes. We then identified 17 host genes for which lower expression was associated with higher residual transcription (HIV usRNA). These included novel associations with membrane channel (<em>KCNJ2</em>, <em>GJB2</em>), inflammasome (<em>IL1A, CSF3, TNFAIP5, TNFAIP6, TNFAIP9, CXCL3, CXCL10</em>), and innate immunity (TLR7) genes (FDR-adjusted q<0.05). Gene set enrichment analyses further identified significant associations of HIV usRNA with TLR4/microbial translocation (q=0.006), IL-1/NRLP3 inflammasome (q=0.008), and IL-10 (q=0.037) signaling. Protein validation assays using ELISA and multiplex cytokine assays supported these observed inverse host gene correlations, with P3H3, IL-10, and TNF-a protein associations achieving statistical significance (p<0.05). Of note, plasma IL-10 was also significantly inversely associated with HIV DNA (p=0.016). HIV intact DNA was not associated with differential host gene expression, although this may have been due to a large number of undetectable values in our study. Further data are needed to validate these findings, including functional genomic studies, larger cohorts including underrepresented PLWH in research, and those including dedicated assays to measure the replication-competent HIV reservoir.</p>
Coevolution with hosts underpins speciation in brood parasitic cuckoos
<p>Coevolution is considered to be a likely driver of speciation, but evidence linking macroevolutionary patterns to microevolutionary processes is scarce. We report that coevolution with hosts drives divergence in bronze-cuckoos. Bronze-cuckoo hosts reject cuckoo nestlings, selecting for mimicry of host nestlings by cuckoos. This has generated a diversity of bronze-cuckoo nestling morphologies matching those of their respective hosts across their geographic range and promotes diversification in sympatry; little bronze-cuckoos that exploit multiple host species in sympatry show evidence of genetic differentiation and corresponding divergence in nestling morphology. This process is reflected in macroevolutionary patterns: rates of speciation are faster in virulent cuckoos than in more benign species and simulation models indicate greater support for a sympatric mode of speciation in bronze-cuckoos than in sister taxa.</p>
Patterns of liana diversity and host interaction networks in selectively-logged and unlogged forests of Uppangala, Western Ghats, India
<p>Lianas shape tropical forest species composition, structure, and dynamics. Increasing climate fluctuation and anthropogenic disturbances increase liana abundance. Despite the increasing number of liana studies in India, only a few have examined the distribution and association of hosts with lianas, or liana-host interaction networks to determine their functional significance and conservational value. Therefore, our objective was to fill the knowledge gap about the diversity, abundance, and network structure of liana-host interactions in response to logging disturbance in a wet evergreen forest of Uppangala in central Western Ghats, India. We sampled lianas ≥1 cm in diameter at 1.3 m from the base and their host trees in thirty 20m x 20m plots in selectively-logged and unlogged forest management regimes. We evaluated liana-host tree interactions in logged and unlogged forests and retrieved community-level measures (nestedness, connectance, modularity, and network specialization index) and species-level indicators (species specialization index). Diversity and abundance of liana species were considerably greater in the selectively logged forest site. The logged forest site had compartmentalization, anti-nestedness, and network specialization, while unlogged forests were not showing any significant network structure. Most species of lianas and hosts were peripherals, but others were structurally important (connectors, module hubs, and network hubs) in the two forest sites. Forest management regimes had distinct structurally significant species.</p>
Figure 50 in Acmaeodera (Coleoptera: Buprestidae): A new species of Acmaeodera Eschscholtz, 1829 from the southwestern United States, with three new synonymies, new state and host records, and a key to species occurring east of the Rocky Mountain states
Figure 50. Acmaeodera xanthosticta Laporte and Gory.
Figure 49 in Acmaeodera (Coleoptera: Buprestidae): A new species of Acmaeodera Eschscholtz, 1829 from the southwestern United States, with three new synonymies, new state and host records, and a key to species occurring east of the Rocky Mountain states
Figure 49. Acmaeodera wenzeli Van Dyke.
Figure 46 in Acmaeodera (Coleoptera: Buprestidae): A new species of Acmaeodera Eschscholtz, 1829 from the southwestern United States, with three new synonymies, new state and host records, and a key to species occurring east of the Rocky Mountain states
Figure 46. Acmaeodera tubulus (Fabricius).
Figure 47 in Acmaeodera (Coleoptera: Buprestidae): A new species of Acmaeodera Eschscholtz, 1829 from the southwestern United States, with three new synonymies, new state and host records, and a key to species occurring east of the Rocky Mountain states
Figure 47. Acmaeodera uvaldensis Knull.
Figure 45 in Acmaeodera (Coleoptera: Buprestidae): A new species of Acmaeodera Eschscholtz, 1829 from the southwestern United States, with three new synonymies, new state and host records, and a key to species occurring east of the Rocky Mountain states
Figure 45. Acmaeodera tiquilia Westcott and Barr.
Figure 43 in Acmaeodera (Coleoptera: Buprestidae): A new species of Acmaeodera Eschscholtz, 1829 from the southwestern United States, with three new synonymies, new state and host records, and a key to species occurring east of the Rocky Mountain states
Figure 43. Acmaeodera texana LeConte.
Figure 42 in Acmaeodera (Coleoptera: Buprestidae): A new species of Acmaeodera Eschscholtz, 1829 from the southwestern United States, with three new synonymies, new state and host records, and a key to species occurring east of the Rocky Mountain states
Figure 42. Acmaeodera starrae Knull.
Figure 41 in Acmaeodera (Coleoptera: Buprestidae): A new species of Acmaeodera Eschscholtz, 1829 from the southwestern United States, with three new synonymies, new state and host records, and a key to species occurring east of the Rocky Mountain states
Figure 41. Acmaeodera scalaris Mannerheim.
Figure 44 in Acmaeodera (Coleoptera: Buprestidae): A new species of Acmaeodera Eschscholtz, 1829 from the southwestern United States, with three new synonymies, new state and host records, and a key to species occurring east of the Rocky Mountain states
Figure 44. Acmaeodera tildenorum Nelson and Westcott.
Figure 40 in Acmaeodera (Coleoptera: Buprestidae): A new species of Acmaeodera Eschscholtz, 1829 from the southwestern United States, with three new synonymies, new state and host records, and a key to species occurring east of the Rocky Mountain states
Figure 40. Acmaeodera rubronotata Laporte and Gory.
Figure 38 in Acmaeodera (Coleoptera: Buprestidae): A new species of Acmaeodera Eschscholtz, 1829 from the southwestern United States, with three new synonymies, new state and host records, and a key to species occurring east of the Rocky Mountain states
Figure 38. Acmaeodera riograndei Nelson.
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.