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Supplementary material 3 from: Saltmarsh DM, Bowser ML, Morton JM, Sirley Lang S, Shain D, Dial R (2016) Distribution and abundance of exotic earthworms within a boreal forest system in southcentral Alaska. NeoBiota 28: 67-86. https://doi.org/10.3897/neobiota.28.5503
Analysis dataset : Explanation note: This spreadsheet file contains all original measurements and derived metrics used in the analyses. It is arranged in a relational format. The sheet labeled site_data contains all site-level data, including original data and some derived metrics; the plot_data sheet contains plot-level data. The earthworm_lengths sheet contains all of the earthworm length measurements and, by implication, the occurrence data. The two response_data sheets hold data derived from the first three sheets that were used in subsequent analyses.
Supplementary material 2 from: Saltmarsh DM, Bowser ML, Morton JM, Sirley Lang S, Shain D, Dial R (2016) Distribution and abundance of exotic earthworms within a boreal forest system in southcentral Alaska. NeoBiota 28: 67-86. https://doi.org/10.3897/neobiota.28.5503
Specimen records : Explanation note: Occurrence data are provided for earthworm specimens collected. Data field definitions are those used by Arctos (http://arctos.database.museum/, http://arctosdb.org/).
Supplementary material 1 from: Eschen R, Grégoire, JC, Hengeveld GM, de Hoop MB, Rigaux L, Potting RPJ (2015) Trade patterns of the tree nursery industry in Europe and changes following findings of citrus longhorn beetle, Anoplophora chinensis Forster. NeoBiota 26: 1-20. https://doi.org/10.3897/neobiota.26.8947
Table S1: Explanation note: Summary of dynamics of the import of Acer plants into the Netherlands in 1998–2012. The number of importing companies relates to the confirmed importers of Acer spp. HU indicates Hungary, AS indicates East-Asia and NZ indicates New Zealand.
Supplementary material 1 from: Pérez-Luque AJ, Zamora R, Bonet FJ, Pérez-Pérez R (2015) Dataset of MIGRAME Project (Global Change, Altitudinal Range Shift and Colonization of Degraded Habitats in Mediterranean Mountains). PhytoKeys 56: 61-81. https://doi.org/10.3897/phytokeys.56.5482
Table S1: Explanation note: Information about transects of the project. Elevation in m a.s.l. Type: AM = Altitudinal migration; FO = Forest; MH = Marginal Habitat. Subtype: AC-e: Abandoned Cropland: edge; AC-i: Abandoned Cropland: inside; Pp-e: Pine plantations: edge; Pp-i: Pine plantations: inside; TE: Treeline Ecotone. Locality: CA = Robledal de Cáñar; SJ = Robledal de San Juan.
Supplementary material 1 from: Solà E, Sluys R, Segev O, Blaustein L, Riutort M (2015) The taxonomic status of Dugesia biblica from Israel and Turkey (Platyhelminthes, Tricladida, Dugesiidae). ZooKeys 506: 1-12. https://doi.org/10.3897/zookeys.506.9663
Supplementary Table 1: Explanation note: Localities in Israel from which no specimens of Dugesia could be obtained during our samplings.
Supplementary material 2 from: Eschen R, Grégoire, JC, Hengeveld GM, de Hoop MB, Rigaux L, Potting RPJ (2015) Trade patterns of the tree nursery industry in Europe and changes following findings of citrus longhorn beetle, Anoplophora chinensis Forster. NeoBiota 26: 1-20. https://doi.org/10.3897/neobiota.26.8947
Table S2: Explanation note: Summary of the intra-European trade in Acer plants from 138 producers in the Boskoop demarcated area in 2009, broken down by country.
Supplementary material 1 from: Saltmarsh DM, Bowser ML, Morton JM, Sirley Lang S, Shain D, Dial R (2016) Distribution and abundance of exotic earthworms within a boreal forest system in southcentral Alaska. NeoBiota 28: 67-86. https://doi.org/10.3897/neobiota.28.5503
Alaska earthworm records : Explanation note: Earthworm records from Alaska exclusive of data from the present study are compiled. All literature items cited are included in the References section of the manuscript.
Supplementary material 1 from: Mesibov R, Car CA (2015) A new genus and species of native exotic millipede in Australia (Diplopoda, Polydesmida, Paradoxosomatidae). ZooKeys 498: 7-16. https://doi.org/10.3897/zookeys.498.9716
Specimen records of Taxidiotisoma portabile: Explanation note: Specimen records of Taxidiotisoma portabile as of 30 March 2015.
Supplementary material 1 from: Mesibov R (2015) Three new species of Tasmaniosoma Verhoeff, 1936 (Diplopoda, Polydesmida, Dalodesmidae) from northeast Tasmania, Australia. ZooKeys 488: 31-46. https://doi.org/10.3897/zookeys.488.9460
Specimen records of Tasmaniosoma species.: Explanation note: Specimen records of Tasmaniosoma species as of 15 February 2015.
Supplementary material 2 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Maximum likelihood model parameters: Explanation note: Model parameters used in the maximum likelihood approach to phylogenetic reconstruction.
Supplementary material 4 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Patterns of COI sequence variation: Explanation note: Patterns of COI sequence variation. Graphs and discussion of patterns of nucleotide substitions in the COI data-set.
Supplementary material 1 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Aligned and concatenated partial sequences of COI and 28S rDNA: Explanation note: Aligned and concatenated partial sequences of COI and 28S rDNA in nexus format. Aligned partial sequences of COI and 28S rDNA from each acanthocephalan population have been concatenated. Gaps are indicated by '-'. The first 585 characters in each block correspond to COI and the remainder to 28S rDNA. The file contains data for all nine Echinorhynchus samples and the outgroup taxon, Acanthocephalus lucii. This nexus file was used in all phylogenetic analyses.
Supplementary material 3 from: Wayland MT, Vainio JK, Gibson DI, Herniou EA, Littlewood TDJ, Väinölä R (2015) The systematics of Echinorhynchus Zoega in Müller, 1776 (Acanthocephala, Echinorhynchidae) elucidated by nuclear and mitochondrial sequence data from eight European taxa. ZooKeys 484: 25-52. https://doi.org/10.3897/zookeys.484.9132
Nucleotide substitutions: Explanation note: Substitutions of nucleotides (transitions/transversions) for 28S rDNA (below the diagonal) and COI sequence data (above the diagonal).
Supplementary material 1 from: Kirichenko N, Huemer P, Deutsch H, Triberti P, Rougerie R, Lopez-Vaamonde C (2015) Integrative taxonomy reveals a new species of Callisto (Lepidoptera, Gracillariidae) in the Alps. ZooKeys 473: 157-176. https://doi.org/10.3897/zookeys.473.8543
List of studied specimens of Callisto coffeella and Callisto basistrigella and collection data.: Explanation note: The list of 135 examined specimens of Callisto coffeella and Callisto basistrigella sp. n., their collection data (country, locality, GPS coordinates, collection date and collector name) and depository data (museum or private collection) are provided in the supplementary table S1. All specimens have been studied morphologically; the barcoded samples are supplied with sample ID, process ID, GenBank COI and GenBank H3 (if nuclear gene histone H3 was analyzed).
Supplementary material 1 from: Mally R, Korycinska A, Agassiz DJL, Hall J, Hodgetts J, Nuss M (2015) Discovery of an unknown diversity of Leucinodes species damaging Solanaceae fruits in sub-Saharan Africa and moving in trade (Insecta, Lepidoptera, Pyraloidea). ZooKeys 472: 117-162. https://doi.org/10.3897/zookeys.472.8781
Overview of specimens intercepted in Great Britain by the Food and Environment Research Agency (Fera).:
Supplementary material 1 from: Mesibov R (2014) The Australian millipede Dicranogonus pix Jeekel, 1982 (Diplopoda, Polydesmida, Paradoxosomatidae): a species with and without paranota. ZooKeys 454: 29-39. https://doi.org/10.3897/zookeys.454.8625
Data table: Explanation note: Known specimen lots of Dicranogonus pix Jeekel, 1982 as of 17 September 2014.
Supplementary material 1 from: Lagos-Kutz D, Favret C, Giordano R, Voegtlin D (2014) Molecular and morphological differentiation between Aphis gossypii Glover (Hemiptera, Aphididae) and related species, with particular reference to the North American Midwest. ZooKeys 459: 49-72. https://doi.org/10.3897/zookeys.459.7850
Table S1. Collection information.: Explanation note: Collection information for specimens included in this study. INHS voucher and GenBank accession numbers are for specimens originating from a specific collection.
Supplementary material 2 from: Fernandez-Triana J, Janzen D, Hallwachs W, Whitfield J, Smith M, Kula R (2014) Revision of the genus Pseudapanteles (Hymenoptera, Braconidae, Microgastrinae), with emphasis on the species in Area de Conservación Guanacaste, northwestern Costa Rica. ZooKeys 446: 1-82. https://doi.org/10.3897/zookeys.446.8195
All sequence and specimen information: Explanation note: Excel file with complete information of the specimens with DNA barcodes.
Supplementary material 2 from: Lagos-Kutz D, Favret C, Giordano R, Voegtlin D (2014) Molecular and morphological differentiation between Aphis gossypii Glover (Hemiptera, Aphididae) and related species, with particular reference to the North American Midwest. ZooKeys 459: 49-72. https://doi.org/10.3897/zookeys.459.7850
Table S2. Morphological characters useful to discriminate Aphid gossypii, Aphid monardae, Aphid oestlundi and Aphid sedi.: Explanation note: Morphological characters useful to discriminate Aphid gossypii, Aphid monardae, Aphid oestlundi and Aphid sedi. For all measurements and counts the range is given and the mean is in parentheses. All measurements in mm. Abbreviations: B base of last antennal segment, CA cauda, DBIII: Distance from the base of antennal segment III to the first secondary sensorium, HT2 second hind tarsus, LHIII longest Hair on ant. segm. III, PT: Processus terminalis, SIPH siphunculi, URS ultimate rostral segment. Data of oviparae of Aphid gossypii from Kim et al. (2010a).
Supplementary material 1 from: Downer R, Ebert T (2014) Macrolepidoptera biodiversity in Wooster, Ohio from 2001 through 2009. ZooKeys 452: 79-105. https://doi.org/10.3897/zookeys.452.8009
Nightly moth captures in Wooster, Ohio and summaries of these data: Explanation note: The first worksheet on the left is the "Introduction". The next page to the right in the file includes the weather data. Then there are nine pages with yearly capture data. These pages include the number of growing degree days accumulated by each collection date. Cells are blank if no individuals of a given species were captured on a specific date. Next is a "Condensed List" that contains total number of each species, and the number of years each species was collected. This page contains the species as they were identified and the equivalent under the system by Lafontaine and Schmidt (2010). It also lists the range in capture date, and range in growing degree days. Then follows total captures per year, and a list of known host plants. The next worksheet is a list of the 13 county records and their collection date. Next is a page with a list of univoltine and bivoltine species selected based on abundance and environmental fidelity. Next is a listing of the 20 pest species and their yearly abundance. This was extracted from the main list to facilitate access. Lastly is a page with the moon phases. We did not find the moon phase data of any use, but it may prove useful to someone else.
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.