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Figure 2 in Morphological and molecular phylogenetic data reveal another new species of bent-toed gecko (Cyrtodactylus Gray: Squamata: Gekkonidae) from Mizoram, India
Figure 2. (a) Ordination of the sex-pooled mountain clade (filled shapes) and lowland clades (unfilled shapes) of Cyrtodactylus species from Mizoram and Meghalaya states along the first two principal components, based on a PCA of the characters FIILamb, FIIILamc, FIVLamc, TILamc, TIILamc, TIIILamb, TVLamc, FILamc, TILama, PVT, DTR, and dorsal spot.
Figure 6 in Morphological and molecular phylogenetic data reveal another new species of bent-toed gecko (Cyrtodactylus Gray: Squamata: Gekkonidae) from Mizoram, India
Figure 6. Habitats of Cyrtodactylus ngopensis sp. nov. from Ngopa, Mizoram, Northeast India: (a) collection site of the holotype at Tuikhur veng, Chawngbawla section, Ngopa; (b) collection site of paratypes at NEC road, Khuangchera section, Ngopa; (c) collection site of paratypes at Taitesena section, Ngopa.
FIGURE 3 in Morphological and molecular data reveal Retiboletus cyanescens sp. nov. and the new subgenus Nigroretiboletorum (Boletaceae)
FIGURE 3. Microscopic features of R. cyanescens (KUN-HKAS 122939). a. Basidiospores; b. Basidia and pleurocystidium; c. Cheilocystidia; d. Pleurocystidia; e. Pileipellis; f. Reticulum on stipe. Scale bars: 10 μm.
FIGURE 2 in Morphological and molecular data reveal Retiboletus cyanescens sp. nov. and the new subgenus Nigroretiboletorum (Boletaceae)
FIGURE 2. Basidiomata of R. cyanescens. a–b. from KUN-HKAS 122939; c. from KUN-HKAS 106692; d. from KUN-HKAS 122940.
FIGURE 1 in Morphological and molecular data reveal Retiboletus cyanescens sp. nov. and the new subgenus Nigroretiboletorum (Boletaceae)
FIGURE 1. Phylogenetic relationships between species of Retiboletus inferred from a multi-locus (tef1-α, rpb2, nrLSU, and ITS) dataset using the Maximum Likelihood and Bayesian Inference methods (only the ML tree is shown). Bootstrap frequencies (≥ 50%) and posterior probabilities (PP ≥ 0.95) are shown above supported branches. Newly sequenced collections are indicated in bold. Vouchers and their localities are provided after the species names.
Raw data for: Sublytic gasdermin-D pores captured in atomistic molecular simulations
<p>This archive contains data and code related to "Sublytic gasdermin-D pores captured in atomistic molecular simulations" by Schaefer & Hummer. Included are molecular dynamics parameter files, initial structures after system equilibration, final structures after production, subsampled production trajectories, and python scripts used for analysis. </p> <p>Publication doi: https://doi.org/10.7554/eLife.81432<br> <br> Contact information:<br> Name: Stefan L. Schaefer<br> Institution: Department of Theoretical Biophysics, Max Planck Institute of Biophysics<br> Address: Max-von-Laue-Str. 3, 60438 Frankfurt am Main, Germany<br> Email: stefan.schaefer@biophys.mpg.de</p>
Figure 4 in Phylogenetic analysis of the predatory plant bug subfamily Deraeocorinae (Hemiptera: Heteroptera: Miridae) based on molecular and morphological data
Figure 4. Model-based phylogenies based on the molecular-only dataset for 51 taxa. A, Bayesian inference tree using MRBAYES; B, maximum likelihood tree using RAxML. Nodal support of PP> 0.5 or BS> 50 displayed as circular and square symbols, respectively.
Figure 7 in Phylogenetic analysis of the predatory plant bug subfamily Deraeocorinae (Hemiptera: Heteroptera: Miridae) based on molecular and morphological data
Figure 7. IW parsimonious tree with K = 9 for 69 taxa, for the combined dataset computed with TNT. Mapped characters refer to unambiguous changes (referred to in the Results and Discussion sections). Filled circles represent synapomorphies and open circles represent homoplasies. Numbers above branches represent jack-knife frequencies (JK) (left) and symmetric resampling values (SR) (right). Numbers below branches represent Bremer support values (BR). Filled stars refer to nodal support of 100. Nodal support of BR> 2 or JK/SR> 50 displayed. Squares indicate the support values on major nodes, and the slash in the square indicates an unsupported clade. Red circle refers to the fossil species Amberderaeous gigophthalmus. Images in the black rectangle (top right) represent the subfamilies used: (a) Cylapinae; (b) Bryocorinae: Monaloniini; (c) Orthotylinae; (d) Bryocorinae: Dicyphini; (e) Phylinae.
Figure 2. Non-genitalic morphological character states. A in Phylogenetic analysis of the predatory plant bug subfamily Deraeocorinae (Hemiptera: Heteroptera: Miridae) based on molecular and morphological data
Figure 2. Non-genitalic morphological character states. A, Deraeocoris oliƲaceus; B, Stethoconus japonicus; C, Deraeocoris sp.; D, Termatophylum hikosanum; E, Bothynotus pilosus; F, Bothynotus sp. in ventral view; G, Saturniomiris lugens (Chan & Cassis, 2020); H, Surinamella doesburgi (from Ferreira et al., 2015); I, Eustictus grossus; J, Amberderaeous gigophthalmus in amber. Scale bars: 1 mm.
Figure 1. Deraeocorinae and feeding habit. A in Phylogenetic analysis of the predatory plant bug subfamily Deraeocorinae (Hemiptera: Heteroptera: Miridae) based on molecular and morphological data
Figure 1. Deraeocorinae and feeding habit. A, Deraeocoris sanghonami; B, Deraeocoris ulmi under bark (overwintering); C, D. ulmi, 3rd instar nymph, feeding on an aphid; D, Deraeocoris ater, 4th instar nymphs, with aphids; E, D. ater, 4th instar nymph, feeding on a moth larva; F, D. ater, adult, feeding on a moth larva.
Figure 3. Genitalic morphological character states. A-M in Phylogenetic analysis of the predatory plant bug subfamily Deraeocorinae (Hemiptera: Heteroptera: Miridae) based on molecular and morphological data
Figure 3. Genitalic morphological character states. A-M, male genitalia; N-O, female genitalia. A-F, left paramere; G-I, right paramere; J-M, endosoma; N, genital chamber; O, valvula. A, H, Deraeocoris ulmi; B, J, Alloeotomus germanicus; C, M, Deraeocoris flaƲilinea; D, Stethoconus japonicus; E, Deraeocoris claspericapilatus; F, G, L, Deraeocoris salicis; I, Deraeocoris oliƲaceus; K, Deraeocoris ater; N, Deraeocoris ribauti; O, Deraeocoris serenus. Scale bars: 0.1 mm.
FIGURE 2 in Morphological and molecular data reveal fifteen new sympatric Zygomyia Winnertz, 1864 (Diptera: Mycetophilidae) species from Ecuador
FIGURE 2. Habitus of Zygomyia species from Ecuador (all photos, except Z. bicolor, are taken from holotypes). A, Z. spinosa sp. nov.; B, Z. ximoi sp. nov.; C, Z. bicolor Edwards, 1934 (MECN-EN-DIP-4873); D, Z. uniordata sp. nov.; E, Z. napoensis sp. nov.; F, Z. trilobata sp. nov.; G, Z. triseta sp. nov.; H, Z. talpaeforma sp. nov. Scale bars = 1 mm.
FIGURE 1 in Morphological and molecular data reveal fifteen new sympatric Zygomyia Winnertz, 1864 (Diptera: Mycetophilidae) species from Ecuador
FIGURE 1. Habitus of Zygomyia species from Ecuador (all photos are taken from holotypes). A, Z. diversiseta sp. nov.; B, Z. longistyla sp. nov.; C, Z. flamma sp. nov.; D, Z. acrotricha sp. nov.; E, Z. paniculata sp. nov.; F, Z. geniculata sp. nov.; G, Z. pectinella sp. nov.; H, Z. comata sp. nov. Scale bars = 1 mm.
FIGURE 9 in Austinixa bragantina Coelho, 2005: a junior synonym of A. aidae (Righi, 1967) (Brachyura: Pinnotheridae) supported by integrative morphological and molecular data
FIGURE 9. Scanning Electron Microscopy of the G1 tips of Austinixa bragantina Coelho, 2005 and A. aidae (Righi, 1967): (A) topotype of A. bragantina, Ilha Canela, Bragança, Pará, Brazil (MOUFPE 13411); (B) A. aidae sensu Coelho (2005), without branchial ridge, Praia de Cumuruxatiba, Prado, Bahia, Brazil (UESC 1124); (C) A. bragantina sensu Coelho (2005), with branchial ridge, Praia de Cumuruxatiba, Prado, Bahia, Brazil (UESC 1124); (D) topotype of A. aidae with branchial ridge, Foz do Rio Juqueriquerê, Caraguatatuba, São Paulo, Brazil (CCDB 3100); (E) topotype of A. aidae without branchial ridge, Foz do Rio Juqueriquerê Caraguatatuba, São Paulo, Brazil (CCDB 3100). Scale bars: A–C = 30 µm; D, E = 20 µm.
FIGURE 10 in Austinixa bragantina Coelho, 2005: a junior synonym of A. aidae (Righi, 1967) (Brachyura: Pinnotheridae) supported by integrative morphological and molecular data
FIGURE 10. Phylogram based on the maximum likelihood of 16S gene sequences of Austinixa Heard & Manning, 1997. Sequences are identified by GenBank accession number or CCDB/UESC catalog number on the left. Numbers at nodes are bootstrap values>50%/0.5 (1000 pseudoreplicates). Carapace figures: A. hardyi modified from Heard & Manning, 1997; A. aidae, male CCDB 3100; A. bragantina, male MOUFPE 13411.
FIGURE 8 in Austinixa bragantina Coelho, 2005: a junior synonym of A. aidae (Righi, 1967) (Brachyura: Pinnotheridae) supported by integrative morphological and molecular data
FIGURE 8. Pleonites of Austinixa aidae (Righi, 1967) from MOUFPE collection: (A–C) male MOUFPE 13411 (as paratypes of A. bragantina); (D) male MOUFPE 13410 (as holotype of A. bragantina); (E) male MOUFPE 9329 (type locality of A. bragantina).
FIGURE 7 in Austinixa bragantina Coelho, 2005: a junior synonym of A. aidae (Righi, 1967) (Brachyura: Pinnotheridae) supported by integrative morphological and molecular data
FIGURE 7. Pereiopods of Austinixa aidae (Righi, 1967) from MOUFPE collection: (A–B) male MOUFPE 13411 (as paratypes of A. bragantina); (C) male MOUFPE 9329 (type locality of A. bragantina).
FIGURE 6 in Austinixa bragantina Coelho, 2005: a junior synonym of A. aidae (Righi, 1967) (Brachyura: Pinnotheridae) supported by integrative morphological and molecular data
FIGURE 6. Austinixa aidae (Righi, 1967) from MOUFPE collection: (A–B) male MOUFPE 13411, right and left chelipeds, respectively; (C) male MOUFPE 13411, right chelipeds; (D) female dissected MOUFPE 13411, right cheliped; (E) male MOUFPE 9329, right and left chelipeds, respectively; (F) MOUFPE 13410, right cheliped.
FIGURE 5 in Austinixa bragantina Coelho, 2005: a junior synonym of A. aidae (Righi, 1967) (Brachyura: Pinnotheridae) supported by integrative morphological and molecular data
FIGURE 5. Austinixa aidae (Righi, 1967) from MOUFPE collection: (A–C) male MOUFPE 13411 (as paratypes of A. bragantina); (D) female dissected MOUFPE 13411 (paratypes of A. bragantina); (E) MOUFPE 13411 (holotype of A. bragantina); (F) male MOUFPE 9329 (from type locality of A. bragantina).
FIGURE 4 in Austinixa bragantina Coelho, 2005: a junior synonym of A. aidae (Righi, 1967) (Brachyura: Pinnotheridae) supported by integrative morphological and molecular data
FIGURE 4. Austinixa aidae (Righi, 1967), SEM of carapace in dorsal view: (A) male topotype of Austinixa bragantina with branchial ridge, Ilha Canela, Bragança, Pará, Brazil (MOUFPE 13411); (B) male topotype of A. aidae without branchial ridge, Foz do Rio Juqueriquerê, Caraguatatuba, São Paulo, Brazil (MZUSP 2233); (C) male of A. bragantina sensu Coelho (2005), with branchial ridge, from Praia de Cumuruxatiba, Prado, Bahia, Brazil (UESC 1124).
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.