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250
datasets available to search
ShareScore release 0.9.0
Dataset results
250 results for “3D analysis”
Temporal analysis suggests a reciprocal relationship between 3D chromatin structure and transcription
GEO Series GSE201376. Homo sapiens. 88 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
A genome-wide analysis of human pluripotent stem cell-derived endothelial cells cultured in synthetic hydrogels compared to standard 2D or 3D cell culture platforms
GEO Series GSE93511. Homo sapiens. 48 samples. Type: Expression profiling by high throughput sequencing.
Comparative 3D genome analysis between neural retina and RPE reveals differential cis-regulatory interactions at retinal disease loci [HiChIP]
GEO Series GSE236021. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Integrative 3D Genomics with Multi-Omics Analysis and Functional Validation of Genetic Regulatory Mechanisms of Abdominal Fat Deposition in Chickens (ATAC-seq).
GEO Series GSE255760. Gallus gallus. 6 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Single-cell analysis of the epigenome and 3D chromatin architecture in the human retina [bulk_ATAC]
GEO Series GSE276851. Homo sapiens. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
single cell RNA-seq analysis of H9-derived expandable hepatoblast organoids and their derivatitives of functional polarized hepatocyte organoids under 3D suspended culture conditions
GEO Series GSE240097. Homo sapiens. 2 samples. Type: Expression profiling by high throughput sequencing.
Systematic analysis of circadian gene expression mediated by epigenetic modification and 3D genome organization in Rice [ATAC-Seq]
GEO Series GSE213089. Oryza sativa Indica Group. 12 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Next Generation Sequencing Facilitates Quantitative Analysis of Control and TRCs(3D)
GEO Series GSE186662. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Transcriptomic analysis of human extravillous trophoblast cells (HTR8/Svneo) cultured as 3D spheroids and 2D monolayers
GEO Series GSE126844. Homo sapiens. 8 samples. Type: Expression profiling by array.
Transcriptomic analysis of human macrophages in 3D
GEO Series GSE124738. Homo sapiens. 12 samples. Type: Expression profiling by high throughput sequencing.
Comparative 3D genome analysis between neural retina and RPE reveals differential cis-regulatory interactions at retinal disease loci [Hi-C]
GEO Series GSE235726. Homo sapiens. 8 samples. Type: Other.
Sex-determining 3D regulatory hubs revealed by genome spatial auto-correlation analysis [Hi-C]
GEO Series GSE217616. Mus musculus. 8 samples. Type: Other.
Sex-determining 3D regulatory hubs revealed by genome spatial auto-correlation analysis
GEO Series GSE217618. Mus musculus. 34 samples. Type: Other; Expression profiling by high throughput sequencing.
Comparative 3D genome analysis between neural retina and RPE reveals differential cis-regulatory interactions at retinal disease loci
GEO Series GSE236022. Homo sapiens. 53 samples. Type: Other; Genome binding/occupancy profiling by high throughput sequencing.
3D Digital Quantitative Analysis of Fracturing in Rock-Encased-Backfill Structure under Hydromechanical Triaxial Loading
Open the record for dataset details and reuse information.
Fig. 1 in Functional morphology of the cave bear (Ursus spelaeus) mandible: a 3D geometric morphometric analysis
Fig. 1 Phylogenetic tree of the family Ursidae as used in the present study, based on BinindaEmonds et al. (1999), Hofreiter et al. (2002) and Krause et al. (2008)
Analysis of TU-LESS by 3D Laparoscopy in the Treatment of Infertility
ClinicalTrials.gov study NCT02948205. IPD Sharing: NO. Countries: 0. Publications: 0.
Assessment of Palatal Mucosal Thickness in Different Vertical Skeletal Pattern: a 3D Analysis
ClinicalTrials.gov study NCT06224478. IPD Sharing: Not stated. Countries: 0. Publications: 0.
Genome wide analysis of skin cancer cell gene expresison exposed to stromal cancer associated fibroblasts in 3D gel matrix
GEO Series GSE36776. Homo sapiens. 4 samples. Type: Expression profiling by array.
Comparative 3D genome analysis between neural retina and RPE reveals differential cis-regulatory interactions at retinal disease loci [UMI4C]
GEO Series GSE235728. Homo sapiens. 41 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.