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zenodo28/100

Supplementary material 4 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887

The interactive Krona chart associated with Figure 2 :

opencc-zeroJan 2018View details →
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Supplementary material 2 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887

The MIxS-BE annotations implemented for the built environment sequences during the workshop :

opencc-zeroJan 2018View details →
zenodo28/100

Figure 3 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887

Figure 3 Analysis of the MIxS-BE "building occupancy type" (type of building where the underlying sample was taken). The figure is based on Abarenkov et al. (2016) plus the data added during the workshop, such that it indicates the scientific state of ITS-based Sanger-derived sequencing of the built mycobiome as of spring 2017.

opencc-by-4.0Jan 2018View details →
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Figure 2 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887

Figure 2 Krona chart of the taxonomic affiliation of the built environment sequences down to order level. The Krona chart lists all annotated built environment sequences except those classified as Fungi sp. (32%) and those of non-fungal origin (1%). An interactive version of the Krona chart is provided as Supplementary material 4. The figure is based on Abarenkov et al. (2016) plus the data added during the workshop, such that it indicates the scientific state of ITS-based Sanger-derived sequencing of the built mycobiome as of spring 2017.

opencc-by-4.0Jan 2018View details →
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Figure 1 from: Nilsson RH, Taylor AFS, Adams RI, Baschien C, Bengtsson-Palme J, Cangren P, Coleine C, Daniel H-M, Glassman SI, Hirooka Y, Irinyi L, Iršėnaitė R, Martin-Sanchez PM, Meyer W, Oh S-Y, Sampaio JP, Seifert KA, Sklenář F, Stubbe D, Suh S-O, Summerbell R, Svantesson S, Unterseher M, Visagie CM, Weiss M, Woudenberg JHC, Wurzbacher C, den Wyngaert SV, Yilmaz N, Yurkov A, Kõljalg U, Abarenkov K (2018) Taxonomic annotation of public fungal ITS sequences from the built environment – a report from an April 10–11, 2017 workshop (Aberdeen, UK). MycoKeys 28: 65-82. https://doi.org/10.3897/mycokeys.28.20887

Figure 1 Analysis of the built environment sequences for country of collection. Country centroids based on the geographical centres of contiguous country land masses are marked with bubbles of different size on the global map to indicate the number of built environment sequences originating from these countries as stated explicitly in the underlying INSDC records or as restored during the present effort and in Abarenkov et al. (2016) (57 distinct countries, sequence count ranging from 1 to 3,091). The figure is based on Abarenkov et al. (2016) plus the data added during the workshop, such that it indicates the scientific state of ITS-based Sanger-derived sequencing of the built mycobiome as of spring 2017.

opencc-by-4.0Jan 2018View details →
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Supplementary material 1 from: Arvidson R, Landa V, Frankenberg S, Adams ME (2018) Life History of the Emerald Jewel Wasp Ampulex compressa. Journal of Hymenoptera Research 63: 1-13. https://doi.org/10.3897/jhr.63.21762

Video :

opencc-zeroMay 2018View details →
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Figure 6 from: Arvidson R, Landa V, Frankenberg S, Adams ME (2018) Life History of the Emerald Jewel Wasp Ampulex compressa. Journal of Hymenoptera Research 63: 1-13. https://doi.org/10.3897/jhr.63.21762

Figure 6 Viscera of P. americana before (A) and after (B) parasitization by A. compressa. A The entire digestive system has been isolated to more thoroughly illustrate all parts of the gut as well as tissues previously obstructed such as trachea, ovaries, thoracic muscle and fat body B Isolated gut from after completion of A. compressa larval development. Abbreviations: TM = thoracic muscle, Tr = trachea, Ovl = ovarioles of ovary, FB = fat body, Cn = colon, Mg = midgut, Cm = caeca, Cp = crop, VNC = ventral nerve cord, Pv = proventriculus.

opencc-by-4.0May 2018View details →
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Figure 3 from: Arvidson R, Landa V, Frankenberg S, Adams ME (2018) Life History of the Emerald Jewel Wasp Ampulex compressa. Journal of Hymenoptera Research 63: 1-13. https://doi.org/10.3897/jhr.63.21762

Figure 3 Ampulex compressa larvae develop through three instars. The number of instars of A. compressa were determined by taking representative larva from different time intervals and plotting the product of the length and width of the head capsule (area) against age of the larva. The data plots as three distinct groups, indicative of three instars (green - first instar, orange - second instar, blue - third instar. Horizontal bars represent average area of the head capsule in each instar and vertical error bars are standard deviation. Each mean head capsule size is significantly different from the others, as indicated by the Kruskal-Wallis test (p < 0.0001).

opencc-by-4.0May 2018View details →
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Figure 2 from: Arvidson R, Landa V, Frankenberg S, Adams ME (2018) Life History of the Emerald Jewel Wasp Ampulex compressa. Journal of Hymenoptera Research 63: 1-13. https://doi.org/10.3897/jhr.63.21762

Figure 2 Cocoon mass and volume can be predictors of sex. The probability that a cocoon will emerge as a female is given as A a function of pupal volume (p < 0.0001, Chi Square = 16.5), and B a function of cocoon mass (p < 0.0001, Chi Square = 19.6)

opencc-by-4.0May 2018View details →
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Figure 1 from: Arvidson R, Landa V, Frankenberg S, Adams ME (2018) Life History of the Emerald Jewel Wasp Ampulex compressa. Journal of Hymenoptera Research 63: 1-13. https://doi.org/10.3897/jhr.63.21762

Figure 1 A. compressa development time and adult size are sexually dimorphic. A Larval development as defined by the duration between egg laying and pupation shows no difference between males and females (black, p = 0.26). Pupal duration - time between cocoon spinning and eclosion - is sexually dimorphic (red, p < 0.0001). Statistical difference determined by Welch's T test, NS = not significant, **** = p < 0.0001. (n = 200, males; n = 135, females) B Cocoon volume (black) of females is significantly larger than that of the males. (female n = 8, male n=21). Adult mass (red) is significantly larger for females (Female n = 8, male n=17). (*** = p < 0.001, **** = p < 0.0001, by Welch's T test). Error bars indicate standard deviation.

opencc-by-4.0May 2018View details →
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Figure 7 from: Arvidson R, Landa V, Frankenberg S, Adams ME (2018) Life History of the Emerald Jewel Wasp Ampulex compressa. Journal of Hymenoptera Research 63: 1-13. https://doi.org/10.3897/jhr.63.21762

Figure 7 Estimation of pupal size by modeling as a parabola. Shape of the Ampulex compressa pupa is a prolate spheroid. Thus, volume of the cocoon can be estimated by modeling it as parabola, rotated about the longitudinal axis, using only length and width measurements.

opencc-by-4.0May 2018View details →
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Figure 4 from: Arvidson R, Landa V, Frankenberg S, Adams ME (2018) Life History of the Emerald Jewel Wasp Ampulex compressa. Journal of Hymenoptera Research 63: 1-13. https://doi.org/10.3897/jhr.63.21762

Figure 4 Comparative morphology of mandibles of the three larval instars of A. compressa. Mandible morphology is unique to each instar and appears to suit the needs of each stage. A First instar mandibles are suitable for piercing the cockroach cuticle and facilitating a steady flow of hemolymph without serious injury to the cockroach B The second instar mandible is larger and contains a serrated edge suitable for cutting into the cockroach to facilitate entry into the host C Third and last instar mandibles appear after the larva has entered the body cavity of the cockroach to consume fat body and muscle. These mandibles appear to be suited for crushing and macerating the internal tissues D All three mandible types together to scale for comparison.

opencc-by-4.0May 2018View details →
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Figures 1-8 from: Adams JK, Schmidt BC (2018) A new species of Sympistis Hübner from Sapelo Island, Georgia, USA (Lepidoptera, Noctuidae, Oncocnemidinae). In: Schmidt BC, Lafontaine JD (Eds) Contributions to the systematics of New World macro-moths VII. ZooKeys 788: 79-86. https://doi.org/10.3897/zookeys.788.26484

Figures 1-8 1Sympistiseleaner male (holotype) 2S.eleaner female (paratype) 3S.induta male 4S.induta female 5S.tenuistriga male 6S.tenuistriga female 7S.badistriga male 8S.badistriga female.

opencc-by-4.0Oct 2018View details →
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Figure 7 from: Constantinescu IC, Popa OP, Popa LO, Cobzaru I, Khlur B MD, Adam C (2018) A new feather mite species of the genus Trouessartia Canestrini, 1899 (Acarina, Trouessartiidae) – an integrative description (morphology and DNA barcoding data). ZooKeys 789: 19-35. https://doi.org/10.3897/zookeys.789.27829

Figure 7 Evolutionary relationship between Trouessartia species inferred using the Neighbor-Joining method. The bootstrap test result (10000 replicates) is shown next to each branch.

opencc-by-4.0Oct 2018View details →
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Figure 6 from: Constantinescu IC, Popa OP, Popa LO, Cobzaru I, Khlur B MD, Adam C (2018) A new feather mite species of the genus Trouessartia Canestrini, 1899 (Acarina, Trouessartiidae) – an integrative description (morphology and DNA barcoding data). ZooKeys 789: 19-35. https://doi.org/10.3897/zookeys.789.27829

Figure 6 Trouessartianiltavae Constantinescu, sp. n., A–D details of female legs, dorsal view: A–leg I, B–leg II, C–leg III, D–leg IV; E–spermatheca and spermaducts of female; Abbreviations: hs – head of spermatheca; pd – primary spermaduct; sd – secondary spermaduct.

opencc-by-4.0Oct 2018View details →
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Figure 8 from: Constantinescu IC, Popa OP, Popa LO, Cobzaru I, Khlur B MD, Adam C (2018) A new feather mite species of the genus Trouessartia Canestrini, 1899 (Acarina, Trouessartiidae) – an integrative description (morphology and DNA barcoding data). ZooKeys 789: 19-35. https://doi.org/10.3897/zookeys.789.27829

Figure 8 Evolutionary relationship between Trouessartia species inferred using the Maximum Likelihood method based on the Tamura-Nei model. The bootstrap test (10000 replicates) shown next to the branches.

opencc-by-4.0Oct 2018View details →
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Figure 3 from: Constantinescu IC, Popa OP, Popa LO, Cobzaru I, Khlur B MD, Adam C (2018) A new feather mite species of the genus Trouessartia Canestrini, 1899 (Acarina, Trouessartiidae) – an integrative description (morphology and DNA barcoding data). ZooKeys 789: 19-35. https://doi.org/10.3897/zookeys.789.27829

Figure 3 Trouessartianiltavae Constantinescu, sp. n., A–D details of male legs, dorsal view: A–leg I, B–leg II, C–leg III, D–leg IV; E–opisthosoma of male, ventral view. Abbreviations: bs – basal sclerite, ea – epiandrum, gp – genital papillae, pm – parameres, pp – postgenital plaque.

opencc-by-4.0Oct 2018View details →
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Figure 5 from: Hwang C-C, Wu S-P (2018) Two new species of Satsuma A. Adams, 1868 from Taiwan (Pulmonata, Camaenidae). ZooKeys 795: 115-126. https://doi.org/10.3897/zookeys.795.28958

Figure 5 Reproductive system showing whole genitalia and opened penis of Satsumaadiriensis sp. n. (paratype NMNS-7945-002). Scale bar: 5 mm.

opencc-by-4.0Nov 2018View details →
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Figure 1 from: Hwang C-C, Wu S-P (2018) Two new species of Satsuma A. Adams, 1868 from Taiwan (Pulmonata, Camaenidae). ZooKeys 795: 115-126. https://doi.org/10.3897/zookeys.795.28958

Figure 1 Distribution map of two Satsuma species in southern Taiwan. A–DS.squamigera sp. n.: A Ka-yo-fong waterfall, Shih-tze, Pingtung (type locality) B Da-han- shan forest road, Pingtung C Mt. Bei-li-long, Pingtung D Mu-dang, Pingtung; E–HS.adiriensis sp. n.: E A-li, Wu-tai, Pingtung (type locality) F Shan-ping, Liu-guei, Kaohsiung G Mt. Fan-bao-jian, Nan-xi, Tainan H Ma-jia, Pingtung.

opencc-by-4.0Nov 2018View details →
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Figure 2 from: Hwang C-C, Wu S-P (2018) Two new species of Satsuma A. Adams, 1868 from Taiwan (Pulmonata, Camaenidae). ZooKeys 795: 115-126. https://doi.org/10.3897/zookeys.795.28958

Figure 2 Shell of Satsumasquamigera sp. n. A shell of holotype (NMNS-7944-001) B scales on base of shell (paratype NMNS-794-002). Scale bar: 10 mm (A), 2 mm (B).

opencc-by-4.0Nov 2018View details →

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