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314
datasets available to search
ShareScore release 0.7.1
Dataset results
314 results for “genome architecture”
DNA methylation maintains integrity of higher order genome architecture (RNA-Seq)
GEO Series GSE159664. Homo sapiens. 6 samples. Type: Expression profiling by high throughput sequencing.
Diploid genome architecture revealed by multi-omic data of hybrid mice
GEO Series GSE132898. Mus musculus. 21 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
Comparative genome-wide identification of transcriptional start sites in two environmentally relevant cyanobacteria reveals unexpected diversity in the transcriptome architecture
GEO Series GSE53065. Prochlorococcus phage P-SSM4; Tiamatvirus PSSP7; Prochlorococcus marinus str. MIT 9313; Prochlorococcus marinus subsp. pastoris str. CCMP1986. 5 samples. Type: Expression profiling by array.
High resolution Hi-C analysis in S. pombe reveals fundamental elements of genome architecture [ChIP-chip]
GEO Series GSE56848. Schizosaccharomyces pombe. 3 samples. Type: Genome binding/occupancy profiling by genome tiling array.
Comparative 3D genomic architectures elucidate the function of the adaptive human-specific inversions in human brain evolution
GEO Series GSE213693. Macaca mulatta; Homo sapiens. 2 samples. Type: Other.
Genome-wide reprogramming of transcript architecture by temperature specifies the developmental states of the human pathogen Histoplasma
GEO Series GSE68707. Histoplasma capsulatum. 24 samples. Type: Expression profiling by high throughput sequencing; Other.
High resolution Hi-C analysis in S. pombe reveals fundamental elements of genome architecture [Expression Array]
GEO Series GSE57159. Schizosaccharomyces pombe. 4 samples. Type: Expression profiling by genome tiling array.
Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories
GEO Series GSE133885. Brassica napus; Triticum aestivum. 10 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
A DNA tumor virus globally reprograms host 3D genome architecture to achieve immortal growth
GEO Series GSE128952. Homo sapiens. 32 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Other.
High resolution Hi-C analysis in S. pombe reveals fundamental elements of genome architecture
GEO Series GSE56849. Schizosaccharomyces pombe. 14 samples. Type: Genome variation profiling by genome tiling array; Genome binding/occupancy profiling by genome tiling array; Other.
Impact of genome architecture upon the functional activation and repression of Hox regulatory landscapes [RNA-seq]
GEO Series GSE129424. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing.
High-resolution mapping of regulatory element interactions and genome architecture using ARC-C
GEO Series GSE144673. Caenorhabditis elegans. 19 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Other.
LncRNA-induced spread of Polycomb controlled by genome architecture, RNA abundance, and CpG island DNA [RNA-Seq]
GEO Series GSE118401. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing.
Chromatin architecture in hexaploid wheat is hierarchically organized around genome territories and transcription factories (Wheat_ATAC)
GEO Series GSE133879. Triticum aestivum. 1 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
Tcf1-CTCF cooperativity shapes genomic architecture to promote CD8+ T cell homeostasis
GEO Series GSE179775. Mus musculus. 49 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
SATB1 Regulates 3D Genome Architecture in T cells by Constraining Chromatin Interactions surrounding CTCF-binding sites [Hi-C]
GEO Series GSE198259. Homo sapiens. 6 samples. Type: Other.
An EGR1-dependent cascade modulates genome architecture at the CSF1R locus [CUT&Run]
GEO Series GSE283672. Homo sapiens. 14 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
SATB1 Regulates 3D Genome Architecture in T cells by Constraining Chromatin Interactions surrounding CTCF-binding sites [CUT&Tag]
GEO Series GSE224728. Homo sapiens. 4 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
The chaperone FACT and H2B ubiquitination maintain S. pombe genome architecture through genic and subtelomeric functions
GEO Series GSE124092. Schizosaccharomyces pombe. 84 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
A Mechanism of Cohesin-Dependent Loop Extrusion Organizes Zygotic Genome Architecture
GEO Series GSE100569. Mus musculus. 144 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.