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278 results for “metabolic modeling”

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geo20/100

Cholesterol metabolism and neuroinflammatory changes in a non-human primate model of neuropathic pain

GEO Series GSE263355. Macaca fascicularis. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2025View details →
geo20/100

Implicating type 2 diabetes effector genes in relevant metabolic cellular models using promoter-focused Capture-C

GEO Series GSE262484. Homo sapiens. 35 samples. Type: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Other.

openGEO-OpenJul 2024View details →
geo20/100

A maple syrup extract alters lipid metabolism in obese type 2 diabetic model mice [adipose]

GEO Series GSE112687. Mus musculus. 16 samples. Type: Expression profiling by array.

openGEO-OpenDec 2019View details →
geo20/100

Transcriptomic profiling of the liver after Roux-en-Y gastric bypass in a humanized murine model of the metabolic syndrome

GEO Series GSE125946. Mus musculus. 15 samples. Type: Expression profiling by array.

openGEO-OpenJul 2019View details →
geo20/100

Catalytically distinct metabolic enzyme isocitrate dehydrogenase 1 mutants tune phenotype severity in tumor models

GEO Series GSE276109. Mus musculus. 22 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenApr 2025View details →
geo20/100

Evaluation of the effects of low nanomolar bisphenol A-like compounds’ levels on early human embryonic development and lipid metabolism with human embryonic stem cell in vitro differentiation models

GEO Series GSE149753. Homo sapiens. 18 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenOct 2020View details →
geo20/100

Inverse data-driven modelling and multiomics analysis reveals PHGDH as a metabolic signature of M2 macrophages

GEO Series GSE118119. Mus musculus. 5 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2019View details →
geo20/100

Gene expression profiling of a mouse model of metabolic syndrome

GEO Series GSE23302. Mus musculus. 30 samples. Type: Expression profiling by array.

openGEO-OpenJun 2011View details →
geo20/100

Model steatogenic compounds (amiodarone, valproic acid, and tetracycline) alter lipid metabolism by different mechanisms in mouse liver slices [Steatogenic compounds exposures]

GEO Series GSE51543. Mus musculus. 23 samples. Type: Expression profiling by array.

openGEO-OpenDec 2013View details →
geo20/100

Integrated metabolic models for xenobiotic induced mitochondrial toxicity in skeletal muscle

GEO Series GSE101847. Rattus norvegicus. 16 samples. Type: Expression profiling by array.

openGEO-OpenJul 2017View details →
geo20/100

RAB38 Facilitates Energy Metabolism and Counteracts Cell Death in Glioblastoma Model Systems

GEO Series GSE162444. Homo sapiens. 4 samples. Type: Expression profiling by array.

openGEO-OpenJun 2021View details →
geo20/100

Altered Genomic Expression of Immune and Metabolic Pathways in a Murine Model of Diesel Enhanced Allergic Sensitization

GEO Series GSE9383. Mus musculus. 24 samples. Type: Expression profiling by array.

openGEO-OpenMar 2008View details →
geo20/100

Network Modeling of Liver Metabolism to Predict Plasma Metabolite Changes During Short-Term Fasting in the Laboratory Rat: Liver Transcriptome Changes in Study 1

GEO Series GSE123935. Rattus norvegicus. 16 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2019View details →
geo20/100

Effect of Traumatic Brain Injury, Erythropoietin and Anakinra on Hepatic Metabolizing Enzymes and Transporters in an Experimental Rodent Model

GEO Series GSE64886. Rattus norvegicus. 50 samples. Type: Expression profiling by array.

openGEO-OpenJun 2015View details →
geo20/100

Preclinical Model of Military Burn Pit Exposure Reveals Altered Inflammatory and Metabolic Pathways in the Rat Lung-Brain Axis

GEO Series GSE281993. Rattus norvegicus. 20 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenAug 2025View details →
geo20/100

Undernutrition disrupts cecal microbiota and epithelium interactions and epithelial metabolism and immune response in a pregnant sheep model

GEO Series GSE221270. Ovis aries. 10 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenMar 2023View details →
geo20/100

Investigating mixotrophic metabolism in the model diatom Phaeodactylum tricornutum.

GEO Series GSE91004. Phaeodactylum tricornutum. 3 samples. Type: Expression profiling by array.

openGEO-OpenMar 2017View details →
geo20/100

Transcriptome analyses reveal metabolic syndrome of adulthood with intrauterine growth restriction in a pig model

GEO Series GSE106512. Sus scrofa. 6 samples. Type: Expression profiling by high throughput sequencing.

openGEO-OpenNov 2017View details →
geo20/100

Multi-omics Analysis Unveils Metabolic Inflexibility Manifesting as Impaired Branched Amino Acid and Enhanced Fatty Acid Degradation in a Mouse Model of Diabetic Cardiomyopathy [ATAC-seq]

GEO Series GSE274499. Mus musculus. 8 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.

openGEO-OpenJan 2025View details →
geo20/100

Implicating type 2 diabetes effector genes in relevant metabolic cellular models using promoter-focused Capture-C [Capture-C]

GEO Series GSE262496. Homo sapiens. 11 samples. Type: Other.

openGEO-OpenJul 2024View details →

ScienceDex guides

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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.

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Allen Brain Atlas

Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.

allen-brain-atlas
neuroscienceopenDocumentation, web resources, and API references are available online.
Last verified 2026-04-30Open record

Annotated Behaviour and Observability Dataset (ABODe)

ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.

abode-home-cage
behavioral-neuroscienceopenThe DataShare record exposes download links for annotations, documentation, license text, and the zipped per-snippet data directory.
Last verified 2026-04-30Open record

DANDI Archive for NWB datasets

DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.

dandi-nwb
electrophysiologyopenPublished Dandiset metadata and archive endpoints are available through the production DANDI API.
Last verified 2026-04-30Open record

International Brain Laboratory public data

The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.

ibl
behavioral-neuroscienceopenPublic sessions can be searched and loaded from the IBL public data server through ONE.
Last verified 2026-04-29Open record

OpenNeuro

OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.

openneuro
neuroscienceopenPublished datasets are available on demand over the internet.
Last verified 2026-04-29Open record