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727 results for “molecular taxonomy”

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FIGURE 14 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 14. SEM photographs of Ordobrevia amamiensis (Nomura) (Kumejima Is., Okinawa Pref.). A, B, head and prothorax; C, thorax and abdominal segments I–III; D, thorax and abdominal segments I–II; E, F, abdominal segments VIII–IX; G, setae on prothorax; H, spines on apico-lateral margin of abdominal segment VII. A, C, E, G, dorsal view; H, lateral view; B, D, F, ventral view. Scale bars: 20 µm in G; 50 µm in H; 200 µm in others.

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FIGURE 13 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 13. SEM photographs of Ordobrevia foveicollis (Schönfeldt) (Dogo Is., Shimane Pref.). A, B, head and prothorax; C, D, abdominal segments I–IV; E, F, abdominal segments VIII–IX; G, setae on prothorax; H, spines on apico-lateral margin of abdominal segment VII. A, C, E, G, dorsal view; H, lateral view; B, D, F, ventral view. Scale bars: 50 µm in G, H; 200 µm in A, B, F; 500 µm C–E.

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FIGURE 15 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 15. SEM photographs of Nomuraelmis amamiensis M. Satô (Okinawajima Is., Okinawa Pref.). A, B, head and prothorax; C, abdominal segments III–V; D, Mesothorax and abdominal segments I–II; E, F, abdominal segments VIII–IX; G, setae on prothorax; H, small spine (an arrow) on abdominal segment IX. A, C, E, G, H, dorsal view; B, D, F, ventral view. Scale bars: 20 µm in G; 50 µm in H; 200 µm in others.

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FIGURE 12 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 12. SEM photographs of Ordobrevia maculata (Nomura) (Izumo, Shimane Pref.). A, B, head and prothorax; C, thorax and abdominal segments I–III; D, abdominal segments II–V; E, F, abdominal segments VII–IX; G, setae on prothorax; H, spines on apico-lateral margin of abdominal segment VII. A, C, E, G, dorsal view; H, lateral view; B, D, F, ventral view. Scale bars: 20 µm in G; 100 µm in H; 200 µm in others.

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FIGURE 11 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 11. SEM photographs of Ordobrevia gotoi Nomura (Izumo, Shimane Pref.). A, B, head and prothorax; C, thorax and abdominal segments I–III; D, abdominal segments I–V; E, F, abdominal segments VIII–IX; G, setae on prothorax; H, spines on apicaolateral margin of abdominal segment VII. A, C, E, G, dorsal view; H, lateral view; B, D, F, ventral view. Scale bars: 20 µm in G; 50 µm in H; 200 µm in others.

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FIGURE 7 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 7. SEM photographs of Stenelmis hisamatsui M. Satô (Amami-Oshima Is., Kagoshima Pref.). A, B, head and thorax; C, abdominal segments I–VII; D, abdominal segments III–VII; E, F, abdominal segments VI–IX; G, H, granules on prothorax. A, C, E, G, H, dorsal view; B, D, F, ventral view. Scale bars: 20 µm in G; 50 µm in H; 200 µm in others.

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FIGURE 16 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 16. Stenelmis canaliculata (Gyllenhal) from Austria (A–C) and Ordobrevia nubifer (Fall) from USA (D–F). A, D, dorsal view; B, E, lateral view; C, F, ventral view. All scale bars are 1.0 mm.

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FIGURE 6 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 6. SEM photographs of Stenelmis nipponica Nomura (Nanbu, Tottori Pref.). A, B, head and prothorax; C, D, meso- and metathorax and abdominal segments I–II; E, F, abdominal segments VIII and IX; G, H, granules on prothorax. A, C, E, G, H, dorsal view; B, D, F, ventral view. Scale bars: 20 µm in G; 200 µm in others.

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FIGURE 5 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 5. SEM photographs of Stenelmis vulgaris Nomura (Izumo, Shimane Pref.). A, B, head and thorax; C, D, abdominal segments II–V; E, F, abdominal segments VIII and IX. A, C, E, dorsal view; B, D, F, ventral view. Scale bars: 200 µm.

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FIGURE 3 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 3. Larvae of Stenelmis and Ordobrevia of Japan. A–C, S. aritai M. Satô; D–F, S. hayashii M. Satô; G–H, O. gotoi Nomura; I–J, O. maculata (Nomura); K–M, O. foveicollis (Schönfeldt). A, D, G, I, K, dorsal view; B, E, H, J, L, lateral view; C, F, M, ventral view. Scale bars:1.0 mm.

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FIGURE 4 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 4. Larvae of Ordobrevia and Nomuraelmis of Japan. A–F, O. amamiensis (Nomura) (A–C, immature larva from Amami-Ôshima Is.; D–F, mature larva from Iriomotejima Is.); G–L, N. amamiensis M. Satô (G–I, mature larva from Amami- Ôshima Is.; J–L, immature larva from Okinawajima Is.).

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FIGURE 2 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 2. Larvae of Stenelmis of Japan. A–C, S. vulgaris Nomura; D–E, S. nipponica Nomura; F–H, S. hisamatsui M. Satô; I–K, S. ishiharai M. Satô. A, D, F, I, dorsal view; B, E, G, J, lateral view; C, H, K, ventral view. Scale bars: 1.0 mm.

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FIGURE 1 in Description of larvae of genera Stenelmis, Ordobrevia and Nomuraelmis (Coleoptera: Elmidae: Elminae) of Japan with their molecular taxonomy

FIGURE 1. Maximum-likelihood tree of mitochondrial COI gene sequences for 14 Japanese elmid species. Numerals on branches are bootstrap percentages (shown when>50%).

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FIGURE 8 in Molecular phylogeny, morphology and taxonomy of Moroccan Triops granarius (Lucas, 1864) (Crustacea: Notostraca), with the description of two new species

FIGURE 8. Triops multifidus sp. nov. A, endopodite and 5th endite of 2nd trunk limb of the holotype (male), anterior view. B, endopodite of 2nd trunk limb of a female of 2.3 mm telson width (from the type locality), anterior view. C, endopodite of 6th trunk limb of a male of 2.3 mm telson width (from the type locality), anterior view. D, endopodite and 5th endite of 2nd trunk limb of a male of 2.2 mm telson width (from population 10), anterior view. E, second antenna of a second instar larva (from the type locality) as seen in a shed exuvium, ventral view. F, general aspect of adult male (showing a specimen of population 13). G, variation in the shape of the nuchal organ: examples (from left to right) from specimen of 2.2 (population 10) 1.8 (population 12, female) 2.4 (holotype) and 2.2 mm telson width (population 8). H, telson of the holotype, dorsal view. I, telson of a male of 2.3 mm telson width (from the type locality), lateral view.

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FIGURE 3 in Molecular phylogeny, morphology and taxonomy of Moroccan Triops granarius (Lucas, 1864) (Crustacea: Notostraca), with the description of two new species

FIGURE 3. Phylogenetic relationships of A, Triops samples obtained in a combined analysis of three molecular markers (12S, 16S, 28S) and B, western Moroccan Triops granarius samples as inferred from 12S sequences (best scoring trees obtained in RAxML are shown). ML bootstrap support/ Bayesian posterior probabilities are given for selected nodes. Provisional taxon labels of previously discovered lineages correspond to those used in Korn et al. (2013). Symbols correspond to those used in Fig. 1.

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FIGURE 7 in Molecular phylogeny, morphology and taxonomy of Moroccan Triops granarius (Lucas, 1864) (Crustacea: Notostraca), with the description of two new species

FIGURE 7. Triops maximus sp. nov. A, carapace of the holotype (male), right lateral view. B, second maxilla of the holotype, anterior view. C, detail of the 1st trunk limb of the holotype, anterior view.

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FIGURE 9 in Molecular phylogeny, morphology and taxonomy of Moroccan Triops granarius (Lucas, 1864) (Crustacea: Notostraca), with the description of two new species

FIGURE 9. Triops multifidus sp. nov. A, carapace of the holotype (male), right lateral view. B, second maxilla of the holotype, anterior view. C, detail of the 1st trunk limb of the holotype, anterior view (note that the epipodite is missing in this sample, possibly due to injury).

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FIGURE 6 in Molecular phylogeny, morphology and taxonomy of Moroccan Triops granarius (Lucas, 1864) (Crustacea: Notostraca), with the description of two new species

FIGURE 6. Triops maximus sp. nov. A, second antenna of a second instar larva (from the type locality) as seen in a shed exuvium, ventral view. B, general aspect of adult male (showing a specimen of population 7). C, variation in the shape of the nuchal organ: examples from specimen of 3.0 (above, left: population 2) 2.3 (below, left: population 18) and 2.2 mm telson width (center, right: holotype). D, endopodite of 6th trunk limb of a male of 2.3 mm telson width (from the type locality), anterior view. E, endopodite and 5th endite of 2nd trunk limb of the holotype (male), anterior view. F, telson of the holotype, dorsal view. G, telson of a male of 2.3 mm telson width (population 18), lateral view.

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FIGURE 2 in Molecular phylogeny, morphology and taxonomy of Moroccan Triops granarius (Lucas, 1864) (Crustacea: Notostraca), with the description of two new species

FIGURE 2. Schematic drawing of A, a detail of the right lateral margin of the telson of a Triops granarius specimen in dorsal view, showing how the length of the largest furcal spine was measured (dotted line), and B, the endopodite of the second trunk limb in anterior view, demonstrating how the length of the endopodite was measured (dotted line). C, a detail of the row of digging spines positioned at the margin of the endopodite showing three examples of length measurements (dotted lines; note that in the present example the largest spine cannot be identified easily so that several rather large spines have to be measured in order to obtain a value for the length of the largest spine) and the position of subsidiary lines used for measurements of spine lengths (dashed lines). D, the distal part of the endopodite showing the distal claw and three of the digging spines. The point where the dashed line (drawn from the base of the distal claw) meets the dotted line (median line of the distal claw) was used as the starting point for length measurements of the endopodite (in the present study the base of the distal claw was defined as the point where the distalmost digging spine diverges from the endopodite). Grey bars (directed approx. in a right angle to measured lines) indicate where measured lines start and end. Abbreviations: C, distal claw; DS, digging spines; SP, largest furcal spine; SPL, length of largest furcal spine; TE, telson; F, furcal ramus.

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FIGURE 1. A in Molecular phylogeny, morphology and taxonomy of Moroccan Triops granarius (Lucas, 1864) (Crustacea: Notostraca), with the description of two new species

FIGURE 1. A, map indicating the geographical position of the study area (marked in black). B, map showing the geographical distribution of studied populations of Triops granarius. Symbols used to mark study sites refer to phylogenetic lineages (see Table 1, Fig. 3; population no. 6 was determined morphologically by DFA in this study). Open square: 'Triops granarius 8'; filled asterisk: 'Triops granarius 10'.

opennotspecifiedDec 2016View details →

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