Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
7,327
datasets available to search
ShareScore release 0.9.0
Dataset results
7,327 results for “pathways”
Figure 1 in Pathway Analysis: Likelihood of Coffee Berry Borer (Hypothenemus hampei Ferrari) Introduction into the Hawaiian Islands by Air Passenger Travel
Figure 1. World coffee production with CBB world distribution: a) 2019 coffee produc- tion (FAO 2020); b) CBB distribution by introduction year (Vega et al. 2015).
Figure 2 in Pathway Analysis: Likelihood of Coffee Berry Borer (Hypothenemus hampei Ferrari) Introduction into the Hawaiian Islands by Air Passenger Travel
Figure 2. Number of months per year with optimal temperature conditions for CBB growth. The optimal temperature conditions were determined by evaluating the area where daily minimum temperature was above 18°C and daily maximum temperature was below 30°C.
Figure 3 in Pathway Analysis: Likelihood of Coffee Berry Borer (Hypothenemus hampei Ferrari) Introduction into the Hawaiian Islands by Air Passenger Travel
Figure 3. Mean annual number of air passengers traveling between the Hawaiian Islands. Dispersal pathways are shown for those islands that are confirmed to have coffee berry borer. Thicker blue lines indicate higher numbers of passengers.
Data repository - Dietary shifts increase the feasibility of 1.5°C pathways
<p>This repository contains modelling results of a study conducted with the opensource Integrated Assessment Modelling (IAM) framework REMIND-MAgPIE (REMIND 3.2.0 and MAgPIE 4.6.7)</p> <p>The source code for REMIND 3.2.0 is openly available at https://github.com/remindmodel and https://doi.org/10.5281/zenodo.7852740. <br> The model documentation can be found at https://rse.pik-potsdam.de/doc/remind/3.2.0. Instructions for software installation, running the model and coupling to MAgPIE (tutorials subfolder) are available at https://github.com/remindmodel/remind.</p> <p>The source code for MAgPIE 4.6.7 is openly available at https://github.com/magpiemodel and https://doi.org/10.5281/zenodo.1418752. <br> The model documentation can be found at https://rse.pik-potsdam.de/doc/magpie/4.6.7/. Instructions for software installation and running the model are available at https://github.com/magpiemodel/magpie.</p>
Transcriptomic analysis of light-induced genes in Nasonia vitripennis: possible implications for circadian light entrainment pathways
<p class="MDPI17abstract"><span>Circadian entrainment to the environmental day-night cycle is essential for the optimal use of environmental resources. In insects, opsin-based photoreception in the compound eye and ocelli, and CRYPTOCHROME1 (CRY1) in circadian clock neurons are thought to be involved in sensing photic information, but genetic regulation of circadian light entrainment in species without light-sensitive CRY1 remains unclear. To elucidate a possible CRY1-independent light transduction cascade, we analysed light-induced gene expression through RNA-sequencing in <em>Nasonia vitripennis</em>. Entrained wasps were subjected to a light pulse in the subjective night to reset the circadian clock and light-induced changes in gene expression were characterized at four different time points in wasp heads. We used co-expression, functional annotation, and transcription factor binding motif analyses to gain insight into the molecular pathways in response to acute light stimulus and form a hypothesis about the circadian light resetting pathway. Maximal gene induction was found after 2h of light stimulation (1432 genes), including the opsin <em>opblue</em> and the core clock genes <em>cry2</em> and <em>npas2</em>. Pathway and cluster analyses revealed light activation of glutamatergic and GABA-ergic neurotransmission, including CREB and AP-1 transcription pathway signalling. This suggests that circadian photic entrainment in <em>Nasonia</em> may require pathways that are similar to mammals. We propose a model for hymenopteran circadian light resetting that involves opsin-based photoreception, glutamatergic neurotransmission, and gene induction of <em>cry2</em> and <em>npas2</em> to reset the circadian clock.</span></p>
Raw data of Decoding the state of stress and fluid pathways along the Andean Southern Volcanic Zone
<p>Raw data of the manuscript. </p> <p>Focal mechanisms and fault slip data of each volcano are attached to this supplementary material, in text files ending with “.fdt”, which can be found in the “Raw Data” folder. The fault slip data, on these text files, are write as strike/dip of the fault plane; trend/plunge of the rake, and the sense of displacement (N=normal R=Reverse), following the MIM-software input format. Note that by defining the displacement as normal o reverse, we are defining that the hanging wall block is going up or down, but it does not mean that the fault kinematics is restricted to normal or reverse. The fault kinematics can be dextral or sinistral strike-slip kinematics depending on the angle between the horizon and the rake projected in the fault plane. In the case of focal mechanisms, one focal mechanism is characterized by two rows of data that represent both focal plane solutions, following the MIM-software format. These “.fdt” files are ready to be analyzed in the MIM software that is freely available on the internet (at <a href="http://bs.kueps.kyoto-u.ac.jp/tsg/software/mim/">http://bs.kueps.kyoto-u.ac.jp/tsg/software/mim/</a>,visited august 2022).</p> <p>Complementarily, an explanation of data, its reference, spatial correlation with the volcano, and methodological details are explained in the excel table “Details_of_Database.xlsx”. Moreover, locations of the fault slip data and epicenter of focal mechanisms can be found in the attached folder “location of data” as Google Earth files (.kmz).</p>
XEN-45 Gel Stent Versus Trabeculectomy in Glaucoma: Gold-Standard Pathway Study (GPS)
ClinicalTrials.gov study NCT03654885. IPD Sharing: YES. Countries: 1. Publications: 1.
Data from: Functional PET/MRI reveals active inhibition of neuronal activity during optogenetic activation of the nigrostriatal pathway
Open the record for dataset details and reuse information.
A dual-pathway architecture for stress to disrupt agency and promote habit
Open the record for dataset details and reuse information.
Data for: Ecological pathways connecting drought to stream invertebrate community shifts across space and time
Open the record for dataset details and reuse information.
Moisture-responsive root-branching pathways identified in diverse maize breeding germplasm
Open the record for dataset details and reuse information.
Data from: Pathways of introduction of alien species in Norway
Open the record for dataset details and reuse information.
Whole genome sequence data of Mycobacterium tuberculosis and Mycolicibacterium smegmatis mutants of the riboflavin biosynthetic pathway- Part 1
Open the record for dataset details and reuse information.
Does tidal marsh restoration lead to the recovery of trophic pathways that support estuarine fishes?
Open the record for dataset details and reuse information.
Data from: Double-strand break repair pathways differentially affect processing and transduction by dual AAV vectors
Open the record for dataset details and reuse information.
Data from: Context-dependent forest elephant seed dispersal: Implications for pathways of elephant-driven patterns of biodiversity and carbon storage
Open the record for dataset details and reuse information.
Data from: Pathways to global-change effects on biodiversity: New opportunities for dynamically forecasting demography and species interactions
Open the record for dataset details and reuse information.
Data from: Stochastic character mapping, Bayesian model selection, and biosynthetic pathways shed new light on the evolution of habitat preference in cyanobacteria
Open the record for dataset details and reuse information.
Forest restoration and fuels reduction work: Different pathways for achieving success in the Sierra Nevada
Open the record for dataset details and reuse information.
Examination of head versus body heading may help clarify the extent to which animal movement pathways are structured by environmental cues?
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.