Find research datasets worth reusing
Search datasets from major research repositories and use ShareScore to quickly assess how well each record supports discovery, access, and reuse.
1,102
datasets available to search
ShareScore release 0.7.1
Dataset results
1,102 results for “plant diversity”
Data from: Revealing biogeographic patterns in genetic diversity of native and invasive plants and their association with soil community diversity in the Chinese coast
<p><span>Within-species genetic diversity is shaped by multiple evolutionary forces within the confines of geography, and has cascading effects on the biodiversity of other taxa and levels. Invasive species are often initially limited in genetic diversity but still respond rapidly to their new range, possibly through 'pre-adapted' genotypes or multiple sources of genetic diversity, but little is known about how their genetic structure differs from that of native species and how it alters the genetic-species diversity relationship.</span><span> Here, we selected a widespread native species (<em>Phragmites australis</em>) and its co-occurring invasive competitor (<em>Spartina alterniflora</em>) as our model plant species. We investigated the genetic structure of <em>P. australis</em> using two chloroplast fragments and ten nuclear microsatellites in 13 populations along the Chinese coastal wetlands. We discovered a distinct geographical differentiation, showing that the northern and southern populations harbored unique genotypes.</span><span> We also found a significant increase in genetic diversity (allelic richness and expected heterozygosity) from south to north. Combined with previous studies of <em>S. alterniflora</em>, </span><span>the Mantel tests revealed</span><span> a significant correlation of genetic distances between <em>P. australis </em>and<em> S. alterniflora</em> even when controlling for geographic distance,</span><span> suggesting that the invasive species <em>S. alterniflora</em> might exhibit a phylogeographic pattern similar to that of the native species to some extent. Furthermore, our results suggest that the <em>S. alterniflora </em>invasion has altered the relationship between the genetic diversity of the dominant native plant and the associated species richness of soil nematodes. The reason for the alteration of genetic-species diversity relationship might be that the biological invasion weakens the environmental impact on both levels of biodiversity. Our findings contribute to understanding the latitudinal patterns of intraspecific genetic diversity in widespread species. This work on the genetic diversity analysis of native species also provides significant implications for the invasion stage and ecological consequences of biological invasions.</span></p>
Data from: Promoting plant diversity and habitat heterogeneity through vineyard terracing
<p><strong><span>Questions</span></strong><span>:</span> <span>Viticulture on steep slopes has shaped landscape and biodiversity in many regions, but insufficient profitability has led to management cessation and shrub encroachment. A solution to maintain cultivation economically viable could be vineyard terracing. We aimed </span><span>to identify the potential of terracing to enhance plant diversity and habitat heterogeneity in vineyards, analyse effects of management intensity on vineyard vegetation, and assess how </span><span>plant communities change after vineyard abandonment.</span></p> <p><span><strong>Location</strong>:</span><span> Wine-growing region of the Upper Middle Rhine Valley in Hesse (50.042342°N, 7.814533°E) and Rhineland-Palatinate (50.119139°N, 7.719275°E), Germany.</span><span> </span></p> <p><span><strong>Methods</strong>:</span><span> We recorded vascular plant species and local vineyard parameters in vertically oriented vineyards with vegetated and tilled open inter-rows, in terraced vineyards with tilled terrace inter-rows and extensively managed embankments and in vineyard fallows in a total of 45 study sites. We used plant species richness, Ellenberg indicator values and Grime's strategy types to describe how traits and ecological requirements respond to distinct vineyard management.</span><span> </span></p> <p><span><strong>Results</strong>:</span><span> Plant species richness and composition were determined by management-derived disturbance intensities. Extensively managed embankments had a distinct plant community, the highest plant species richness, more perennial and indicator species, and lower nitrogen indicator values compared to inter-rows. In contrast, highly disturbed open and terrace inter-rows revealed plant communities associated with annuals and ruderals, but species richness did not differ between terrace inter-rows and embankments. Plant communities of fallows were completely different with lower plant diversity. </span><span> </span></p> <p><span><strong>Conclusions</strong>:</span> <span>Our results highlight the potential of terraced vineyards for plant diversity with nutrient-poor, extensively managed embankments providing conditions that have become rare in modern agricultural systems. A long environmental gradient from terrace inter-rows to embankments created habitat heterogeneity at a narrow space. In contrast, intensive inter-row management in vertically oriented vineyards hampers high plant diversity and abandonment</span><span> fosters the spread of woody species at the expanse of plant diversity.</span></p>
Spatial patterns of phylogenetic and species diversity of Fennoscandian vascular plants in protected areas
<p>Protected areas are one of the main strategic means for conserving biodiversity. Yet, the design of protected areas usually neglects phylogenetic diversity, an important diversity measure. In this paper, we assess the phylogenetic diversity and species richness of vascular plants in Fennoscandian protected areas. We evaluate how much species richness and phylogenetic diversity is found within and outside protected areas, and the differences in diversity between different categories of protected areas. We also assess the differences in the diversity-area relationship of the different protected area categories in terms of both species richness and phylogenetic diversity. We build a multi-locus phylogeny of 1,519 native vascular plants of Norway, Sweden, and Finland. We estimate the phylogenetic diversity and species richness by combining the phylogeny with publicly available occurrence data and the currently protected area system of Fennoscandia. Our results indicate that protected areas in Fennoscandia hold more diversity when larger, and that phylogenetic diversity increases faster with area than species richness. We found evidence for more diversity outside of protected areas of the different countries of Fennoscandia than inside of protected areas, but no evidence for diversity differences between areas with different protection status. Hence, our results indicate that the current protected area system in Fennoscandia is no more effective in conserving phylogenetic diversity and species richness of vascular plants than a random selection of localities. Our results also indicate that planning conservation strategies around phylogenetic diversity, rather than species richness, might be more effective in protecting vascular plant diversity.</p>
Plant diversity and soil legacy independently affect the plant metabolome and induced responses following herbivory
<p><span>Plant and soil biodiversity can have significant effects on herbivore resistance mediated by plant metabolites. Here, we disentangled the independent effects of plant diversity and soil legacy on constitutive and herbivore-induced plant metabolomes of three plant species in two complementary microcosm experiments.</span></p> <p><span>First, we grew plants in sterile soil with three different plant diversity levels. Second, single plant species were grown on soil with different plant diversity-induced soil legacies. We infested a subset of all plants with <em>Spodoptera</em> <em>exigua</em> larvae, a generalist leaf-chewing herbivore, and assessed foliar and root metabolomes.</span><span> </span></p> <p><span>Neither plant diversity nor soil legacy had significant effects on overall foliar, root, or herbivore-induced metabolome composition. Herbivore-induced metabolomes, however, differed from those of control plants. We detected 139 significantly regulated metabolites by comparing plants grown in monocultures with conspecifics growing in plant or soil legacy mixtures. Moreover, plant-plant and plant-soil interactions regulated 141 metabolites in herbivore-induced plants.</span><span> </span></p> <p><span>Taken together, plant diversity and soil legacy independently alter the concentration and induction of plant metabolites, thus affecting the plant's defensive capability. This is a first step towards disentangling plant and soil biodiversity effects on herbivore resistance, thereby improving our understanding of the mechanisms that govern ecosystem functioning.</span></p>
Effects of disturbance on genetic diversity in the submersed aquatic plant Vallisneria americana
<p>In summer 2011, Tropical storms Lee and Irene caused an estimated 90% decline of the submersed aquatic plant <em>Vallisneria americana</em> Michx. (Hydrocharitaceae) in the Hudson River, of New York (USA). To understand the genetic impact of such large-scale demographic losses, we compared diversity at 10 microsatellite loci in 135 samples collected from 5 sites just before the storms with 239 shoots collected from 9 sites four years after. Although 80% of beds sampled in 2011 lacked <em>V. americana</em> in 2015, we found similar genotypic and genetic diversity and effective population sizes in pre-storm versus post-storm sites. These similarities suggest that despite local extirpations concentrated at the upstream end of the sampling area, <em>V. americana</em> was regionally resistant to genetic losses. Similar geographically based structure among sites in both sampling periods suggested that cryptic local refugia at previously occupied sites facilitated re-expansion after the storms. However, this apparent resistance to disturbance may lead to a false sense of security. Low effective population sizes and high clonality in both time periods suggest that <em>V. americana</em> beds were already small and had high frequency of asexual reproduction before the storms. Dispersal was not sufficient to recolonize more isolated sites that had been extirpated. Chronic low diversity and reliance on asexual reproduction for persistence can be risky when more frequent and intense storms are paired with ongoing anthropogenic stressors. Monitoring genetic diversity along with extent and abundance of <em>V. americana</em> will give a more complete picture of long-term potential for resilience.</p>
Data from: An established plant invader may still benefit from increasing genetic diversity – Insights from artificial populations in a common garden experiment
Open the record for dataset details and reuse information.
Global responses of plant abundance, diversity, and fitness to increased fire severity or frequency
Open the record for dataset details and reuse information.
Plant productivity response to inter- and intra-symbiont diversity: mechanisms, manifestations, and meta-analyses
Open the record for dataset details and reuse information.
Data from: Links between plant and fungal diversity in habitat fragments of coastal shrubland
Open the record for dataset details and reuse information.
Ecological data from: Combining botanical collections and ecological data to better describe plant community diversity
Open the record for dataset details and reuse information.
Close to the edge: Spatial variation in plant diversity, biomass and floral resources in conventional and agri-environment cereal fields
Open the record for dataset details and reuse information.
Data from: Multiple facets of diversity effects on plant productivity: species richness, functional diversity, species identity and intraspecific competition
Open the record for dataset details and reuse information.
Landscape simplification leads to loss of plant-pollinator interaction diversity and flower visitation frequency despite buffering by abundant generalist pollinators
Open the record for dataset details and reuse information.
Data from: Resource quantity and heterogeneity drive successional plant diversity in managed and unmanaged boreal forests
Open the record for dataset details and reuse information.
Data from: Differential effects of pollen nutritional quality on male and female reproductive success across plant species within a diverse co-flowering community
Open the record for dataset details and reuse information.
Area, connectivity and plant life strategy diversity and abundance in temporary ponds of Southeastern Carpathians (Romania, Europe)
Open the record for dataset details and reuse information.
Flower color and flowering phenology mediate plant-pollinator interaction assembly in a diverse co-flowering community
Open the record for dataset details and reuse information.
Agricultural intensification reduces plant taxonomic and functional diversity across European arable systems.
Open the record for dataset details and reuse information.
Plant and frugivore species characteristics drive frugivore contributions to seed dispersal effectiveness in a hyper-diverse community
Open the record for dataset details and reuse information.
Non-linear thresholds in the effects of island area on functional diversity in woody plant communities
Open the record for dataset details and reuse information.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.