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371
datasets available to search
ShareScore release 0.9.0
Dataset results
371 results for “single cell genomics”
Genome-wide DNA replication profiling and full-length total RNA sequencing from the same single cell [HAP1 mid-S]
GEO Series GSE278952. Homo sapiens. 131 samples. Type: Expression profiling by high throughput sequencing; Other.
High-resolution 3D genome structures via single-cell Micro-C uncovers cohesin-mediated enhancer-promoter loops (SDS test)
GEO Series GSE280482. Homo sapiens. 71 samples. Type: Other.
A genome-wide relay of signalling-responsive enhancers drives hematopoietic specification (Single cell RNA-Seq)
GEO Series GSE198774. Mus musculus. 4 samples. Type: Expression profiling by high throughput sequencing.
Integrated single-cell transcriptomics and functional genomics reveal RAD51B as an essential gene in near-haploid leukemia
GEO Series GSE201080. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
Leveraging Two Novel Droplet-Based Single-Cell RNA Sequencing Platforms: a Comparative Study With 10x Genomics
GEO Series GSE300217. Homo sapiens; Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
A single-cell method to map higher-order 3D genome organization in thousands of individual cells reveals structural heterogeneity in mouse ES cells
GEO Series GSE154353. Mus musculus; Homo sapiens. 3 samples. Type: Other.
BART-Seq: cost-effective massively parallelized targeted sequencing for genomics, transcriptomics, and single cell analysis [Differentiation]
GEO Series GSE130420. Homo sapiens. 3 samples. Type: Other; Expression profiling by high throughput sequencing.
Single-cell RNA-seq (10X Genomics Chromium) of LGE, MGE, CGE, and Cortex from mouse embryonic forebrain
GEO Series GSE190593. Mus musculus. 13 samples. Type: Expression profiling by high throughput sequencing.
10x Genomics single-cell RNA-seq of isolated Adult ID4-EGFP-bright mouse spermatogonia treated with Rapamycin
GEO Series GSE152930. Mus musculus. 3 samples. Type: Expression profiling by high throughput sequencing.
Genome-wide maps of nuclear lamina interactions in single human cells. (DamID; LaminB1, clone-14, haploid)
GEO Series GSE68263. Homo sapiens. 124 samples. Type: Other.
Single cell transcriptomic analysis (10x Genomics) of mouse splenic CD4+ T cells
GEO Series GSE111070. Mus musculus. 1 samples. Type: Expression profiling by high throughput sequencing.
Simultaneous profiling of 3D genome structure and DNA methylation in single human cells
GEO Series GSE130711. Homo sapiens. 4238 samples. Type: Methylation profiling by high throughput sequencing; Other.
10X genomics single cell sequencing of sheep testis
GEO Series GSE159599. Ovis aries. 1 samples. Type: Expression profiling by high throughput sequencing.
A single-cell atlas of chromatin accessibility in the human genome
GEO Series GSE184462. Homo sapiens. 72 samples. Type: Genome binding/occupancy profiling by high throughput sequencing.
EZH2 mutations reprogram the immune response to yield a pre-malignant lymphoma niche [Single cell RNA-Seq (10X Genomics)]
GEO Series GSE138033. Mus musculus. 6 samples. Type: Expression profiling by high throughput sequencing.
Single-cell RNAseq analysis (10X Genomics Chromium) of residual bronchoalveolar lavage fluids in healthy, fumer and COPD patients
GEO Series GSE183974. Homo sapiens. 9 samples. Type: Expression profiling by high throughput sequencing.
Single-cell genomics & regulatory networks for 388 human brains
GEO Series GSE261983. Homo sapiens. 40 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
DMSO cryopreservation: the method of choice for droplet-based single-cell RNA sequencing of preserved cells [10X Genomics]
GEO Series GSE127248. Rattus norvegicus. 8 samples. Type: Expression profiling by high throughput sequencing.
Functional phenotyping of genomic variants using joint multiomic single-cell DNA-RNA sequencing
GEO Series GSE268646. Homo sapiens; Mus musculus. 17 samples. Type: Expression profiling by high throughput sequencing; Other.
Droplet-based high-throughput 3D genome structure mapping of single cells with simultaneous transcriptomics (cell-line)
GEO Series GSE285230. Homo sapiens; Mus musculus. 6 samples. Type: Other.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.