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3,761 results for “phylogenetic relationship”
FIGURE 1. Phylogenetic relationships among S in Stellaria pentastyla (Caryophyllaceae), a new species from Yunnan (China)
FIGURE 1. Phylogenetic relationships among S. pentastyla and representative species of Stellaria based on ITS, trnL-F, matK sequences data. The numbers under the nodes are maximum likelihood bootstrap percentages, Bayesian posterior probabilities, and maximum parsimony bootstrap percentages (BP ML, PP, BP MP), respectively. "*" indicates that the node is incongruent between the topology of the Bayesian tree and the MP/ML trees.
FIGURE 4. Phylogenetic relationships among A in Aster huangpingensis (Asteraceae, Astereae), a new species from Guizhou, China
FIGURE 4. Phylogenetic relationships among A. huangpingensis and other sampled Aster species based on nrDNA ITS-ETS sequence data. Bayesian posterior probabilities (PP ≥ 0.50, left) and bootstrap support values (1,000 replicates) for maximum parsimony (MP ≥ 50%, right) are provided above the branches. The tree is rooted with Callistephus chinensis and Myriactis nepalensis. The three samples of the new species are indicated in bold.
FIGURE 1 in Phylogenetic relationships of Silene sections Lasiostemones and Sclerocalycine (Caryophyllaceae) in Iran
FIGURE 1. Fifty percent majority rule consensus tree resulting from Bayesian analysis of nrDNA ITS dataset. Numbers above branches are posterior probability (PP) and numbers below branches are bootstrap values from maximum parsimony (PBS) analyses. The newly sequenced accessions are in Bold-Italic and all other sequences are taken from the GenBank. (only values greater than 0.95 for PP, and 75 % for BS are shown). Clade 1: subg. Behenantha, Clade 2: subg. Silene, Clade A: sect. Auriculatae, Clade B: sect. Arenosae, Clade C: sect. Siphonomorpha s.l. (Clade C1, C3 & C4) and the first group of sect. Lasiostemones (Clade C2), Clade D: Sect. Rigidulae, Clade E1: S. gaubae, Clade E2: the second group of sect. Lasiostemones, Clade E3: sect. Sclerocalycine.
FIGURE 2 in Phylogenetic relationships of Silene sections Lasiostemones and Sclerocalycine (Caryophyllaceae) in Iran
FIGURE 2. Fifty percent majority rule consensus tree resulting from Bayesian analysis of rps16 dataset. Numbers above branches are posterior probability (PP) and numbers below branches are bootstrap values from maximum parsimony (PBS) analyses. The newly sequenced accessions are in Bold-Italic and all other sequences are taken from the GenBank. (only values greater than 0.95 for PP and 75 % for BS are shown). Clade 1: subg. Behenantha, Clade 2: subg. Silene, Clade A: sect. Auriculatae, Clade B: sect. Arenosae, Clade C: sect. Siphonomorpha s.l. (Clade C1) and the first group of sect. Lasiostemones (Clade C2). Clade D: Sect. Rigidulae, Clade E: Sclerocalycine and the second group of sect. Lasiostemones.
Data from: Phylogenetic relationships in Calyptranthes (Myrtaceae) with particular emphasis on its monophyly relative to Myrcia s. l.
Calyptranthes is the largest clade of Myrcia s. l., and is a group of considerable diversity in the threatened Atlantic forest biome of Brazil, as well as in the Amazon, Caribbean, and Cerrado. Here an expanded, geographically and morphologically representative sample of Calyptranthes is tested for monophyly; the majority of species are shown to emerge as a monophyletic clade embedded within Myrcia s. l. A single species, Calyptranthes multiflora, emerges in an independent clade, suggesting wider non-monophyly. Patterns of relationships within the group are detected, and these correlate more closely with geography than with morphology, and suggest that the oldest lineages of Calyptranthes are from what is now the Amazon forest, with later radiations to the Caribbean, Atlantic forest, and Cerrado biomes.
FIGURE 4 in Phylogenetic relationships among families of the order Anomopoda (Crustacea, Branchiopoda, Cladocera)
FIGURE 4. Structure of trunk limb IV (TL IV) of the Anomopoda. A. Simocephalus mixtus, representing the daphniid+moinidtype; B. Ilyocryptus spinifer; C. Bosmina freyi; D. Macrothrix paulenesis, representing the Radopodatype. EN endites; EX exopodite; FC gnathobasic filter comb; GN gnathobase; es endite setae; ees external endite setae; ies internal endite setae.
FIGURE 2. The 50 in Phylogenetic relationships among families of the order Anomopoda (Crustacea, Branchiopoda, Cladocera)
FIGURE 2. The 50% majorityrule consensus of 2000 trees of minimum length (l = 208 steps; CI = 0.5769; RI = 0.8603; RCI = 0.4963) for the families of the Anomopoda.
FIGURE 3 in Phylogenetic relationships among families of the order Anomopoda (Crustacea, Branchiopoda, Cladocera)
FIGURE 3. Structure of a generalized trunk limb of the Pseudosida (outgroup taxon) and trunk limb II (TL II) of the Anomopoda. A. Pseudosida; B. Moinodaphnia macleayi, representing the daphniid+moinidtype; C. Ilyocryptus spinifer; D. Eurycercus sp, representing the Radopodatype. EN endites; EX exopodite; FC gnathobasic filter comb; GN gnathobase.
FIGURE 1 in Phylogenetic relationships among families of the order Anomopoda (Crustacea, Branchiopoda, Cladocera)
FIGURE 1. The strict consensus of 2000 trees of minimum length (l = 208 steps; CI = 0.5769; RI = 0.8603; RCI = 0.4963) for the families of the Anomopoda.
FIGURE 1. The single tnt generated maximum likelihood cladogram showing internal cladistic relationships within Seraphsidae Jung, 1974 in Resolving phylogenetic and classical nomenclature: A revision of Seraphsidae Jung, 1974 (Gastropoda: Neostromboidae)
FIGURE 1. The single tnt generated maximum likelihood cladogram showing internal cladistic relationships within Seraphsidae Jung, 1974.
FIGURES 41–44 in Phylogenetic relationships of the subfamily Pyrgulinae (Gastropoda: Caenogastropoda: Hydrobiidae) with emphasis on the genus Dianella Gude, 1913
FIGURES 41–44. female reproductive organs of Dianella thiesseana, Lake Trichonida: 41. pallial complex with coiled oviduct in natural position; 42. bursa copulatrix, seminal receptacle and coiled oviduct in natural position; 43–44. coiled oviduct and seminal receptacle.
FIGURES 38–40 in Phylogenetic relationships of the subfamily Pyrgulinae (Gastropoda: Caenogastropoda: Hydrobiidae) with emphasis on the genus Dianella Gude, 1913
FIGURES 38–40. renal and pallial section of female reproductive organs: 38. Dianella thiesseana, Lake Trichonida; 39. Pyrgula annulata, Lake Garda; 40. Dianella thiesseana, SURFDRIVER threedimensional reconstruction of kidney, accessory gland complex, oviduct and ventral channel, in natural position the structure would be more coiled (bc — bursa copulatrix, cbc — canal of bursa copulatrix, ga — albumen gland, gn — capsule gland, gp — gonoporus, k — kidney, ov — pallial oviduct, ovs — spiral coiled "renal" oviduct, rec — rectum, rs — seminal receptacle, vc — ventral channel)
FIGURES 45–48 in Phylogenetic relationships of the subfamily Pyrgulinae (Gastropoda: Caenogastropoda: Hydrobiidae) with emphasis on the genus Dianella Gude, 1913
FIGURES 45–48: transverse sections of female reproductive organs of Dianella thiesseana, Lake Trichonida: 45. section through capsule gland (with visible ventral channel) and kidney (on the left); 46. ventral channel; 47–48. gradual separation of duct of bursa and oviduct from capsule gland
FIGURES 29–31 in Phylogenetic relationships of the subfamily Pyrgulinae (Gastropoda: Caenogastropoda: Hydrobiidae) with emphasis on the genus Dianella Gude, 1913
FIGURES 29–31. pyrgulid heads and penes: 29–30. Dianella thiesseana, Lake Trichonida: 29. head with penis in natural position (bar equals 500 µm), 30. penis (bar equals 250 µm); 31. penis of Pyrgula annulata, Lake Garda.
FIGURES 21–26 in Phylogenetic relationships of the subfamily Pyrgulinae (Gastropoda: Caenogastropoda: Hydrobiidae) with emphasis on the genus Dianella Gude, 1913
FIGURES 21–26. pyrgulid radulae: 21–22. Pyrgula annulata, Lake Garda: 21. central tooth (bar equals 5 µm), 22. half a transverse row (bar equals 10 µm); 23–26. Dianella thiesseana, Lake Trichonida: 23. lateral and marginal teeth (bar equals 10 µm), 24. central tooth (bar equals 5 µm), 25. radula with teeth in natural position (bar equals 10 µm), 26. central and marginal teeth (bar equals 10 µm)
FIGURES 27–28 in Phylogenetic relationships of the subfamily Pyrgulinae (Gastropoda: Caenogastropoda: Hydrobiidae) with emphasis on the genus Dianella Gude, 1913
FIGURES 27–28. histological sections of Dianella thiesseana: 27. head, with transverse section of oesophagus; 28. stomach, with caecal appendix on its left side.
FIGURES 3–20 in Phylogenetic relationships of the subfamily Pyrgulinae (Gastropoda: Caenogastropoda: Hydrobiidae) with emphasis on the genus Dianella Gude, 1913
FIGURES 3–20. pyrgulid shells: 3–15. Dianella thiesseana: 3–11. Lake Trichonida; 12–15. Lake Lysymachia; 16–20. Pyrgula annulata: 16–17. Lake Garda, Sirmione, 18–20. River Neretva at Kula; bar equals 3 mm.
FIGURE 2 in Phylogenetic relationships of the subfamily Pyrgulinae (Gastropoda: Caenogastropoda: Hydrobiidae) with emphasis on the genus Dianella Gude, 1913
FIGURE 2: Reconstruction of morphological changes in rissooidean taxa on the Bayesian tree topology from Fig. 1B. Each bar indicates a single change; character numbers as in Table 2, character state changes are given below character numbers
FIGURES 32–37 in Phylogenetic relationships of the subfamily Pyrgulinae (Gastropoda: Caenogastropoda: Hydrobiidae) with emphasis on the genus Dianella Gude, 1913
FIGURES 32–37. male reproductive organs of Dianella thiesseana: 32. head with penis; 33–36. penis: 33–35. from dorsal side, 36. from ventral side; 37. transverse section through prostate.
FIGURE 1 in Phylogenetic relationships of the subfamily Pyrgulinae (Gastropoda: Caenogastropoda: Hydrobiidae) with emphasis on the genus Dianella Gude, 1913
FIGURE 1: A. 50% majority rule consensus tree of the two most parsimonious reconstructions for rissooidean taxa based on the anatomical characters listed in Table 2. B. 50% majority rule consensus tree based on the anatomical characters listed in Table 3. C. Bayesian phylogram for rissooidean taxa based on combined fragments for COI DNA as well as SSU and LSU rRNA showing the 50% majority rule consensus of topologies sampled during the Bayesian search. The scale bar represents the substitutions per site according to the model of sequence evolution applied. Posterior probabilities are provided for each clade. Familylevel groups are marked with black bars. The outgroup taxon, Rissoa, was removed a posterior from the trees.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.