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FIGURE 4. Leiolopisma ceciliae n in A new Nactus gecko (Gekkonidae) and a new Leiolopisma skink (Scincidae) from La Réunion, Indian Ocean, based on recent fossil remains and ancient DNA sequence

FIGURE 4. Leiolopisma ceciliae n. sp., material from Grotte au Sable, St-Gilles, La Réunion. Holotype. Dentary (lateral and medial views). Scale in mm.

FIGURE 5. Leiolopisma ceciliae n in A new Nactus gecko (Gekkonidae) and a new Leiolopisma skink (Scincidae) from La Réunion, Indian Ocean, based on recent fossil remains and ancient DNA sequence

FIGURE 5. Leiolopisma ceciliae n. sp., material from Grotte au Sable, St-Gilles, La Réunion. Selected paratypes, from individuals of various sizes. Top row: left mandible (lateral view), right maxilla (lateral view), fused left postfrontal and postorbital bone (dorsal view), left quadrate (posterior view). Middle row: right dentary (medial view), posterior left mandible (lateral view). Bottom row: Left humerus, left pelvis (lateral view), sacrum (dorsal view), presacral vertebrae (lateral and ventral views), right femur, tibia. Scale in mm.

FIGURE 6. Leiolopisma ceciliae n in A new Nactus gecko (Gekkonidae) and a new Leiolopisma skink (Scincidae) from La Réunion, Indian Ocean, based on recent fossil remains and ancient DNA sequence

FIGURE 6. Leiolopisma ceciliae n. sp., material from Grotte au Sable, St-Gilles, La Réunion. Paratype. Frontal of juvenile animal (ventral and dorsal views, anterior upwards). Scale in mm.

FIGURE 7 in A new Nactus gecko (Gekkonidae) and a new Leiolopisma skink (Scincidae) from La Réunion, Indian Ocean, based on recent fossil remains and ancient DNA sequence

FIGURE 7. Variation in number of teeth with size of maxillae (above) and dentary bones (below) in different species of the Mascarene skink genus Leiolopisma. Stars: L. ceciliae n. sp. from La Réunion. Assemblage to left: L. telfairii from Mauritius (triangles: living animals from Round Island, dots: subfossil material from mainland of Mauritius). Assemblage to right: subfossil L. mauritiana from mainland of Mauritius. Some symbols indicate more than one specimen.

FIGURE 2. Nactus soniae n in A new Nactus gecko (Gekkonidae) and a new Leiolopisma skink (Scincidae) from La Réunion, Indian Ocean, based on recent fossil remains and ancient DNA sequence

FIGURE 2. Nactus soniae n. sp., material from Grotte au Sable, St-Gilles, La Réunion. c. Paratypes. Left maxilla and right dentary (medial views). Scales in mm.

FIGURE 3. Nactus soniae n in A new Nactus gecko (Gekkonidae) and a new Leiolopisma skink (Scincidae) from La Réunion, Indian Ocean, based on recent fossil remains and ancient DNA sequence

FIGURE 3. Nactus soniae n. sp. Scanning electron microscope photograph of holotype frontal bone (dorsal view).

FIGURE 2a, 2b. Nactus soniae n in A new Nactus gecko (Gekkonidae) and a new Leiolopisma skink (Scincidae) from La Réunion, Indian Ocean, based on recent fossil remains and ancient DNA sequence

FIGURE 2a, 2b. Nactus soniae n. sp., material from Grotte au Sable, St-Gilles, La Réunion. a. Holotype. Frontal bone (dorsal and ventral views). Scale in mm. b. Paratypes. Left maxilla and right dentary (lateral views). Scales in mm.

FIGURE 1 in A new Nactus gecko (Gekkonidae) and a new Leiolopisma skink (Scincidae) from La Réunion, Indian Ocean, based on recent fossil remains and ancient DNA sequence

FIGURE 1. Phelsuma sp., material from Grotte au Sable, St-Gilles, La Réunion. Above: frontals (dorsal and ventral views). Below: left maxilla (medial view). Scale in mm.

FIGURE 1. Bayesian tree inferred from SSU gene DNA sequences. Posterior probabilities exceeding 50 in A review of the genus Tripylina Brzeski, 1963 (Nematoda: Triplonchida), with descriptions of five new species from New Zealand

FIGURE 1. Bayesian tree inferred from SSU gene DNA sequences. Posterior probabilities exceeding 50% are given on appropriate clades. Nematode species, GenBank numbers, locations are listed for each taxon if known.

FIGURE 2. Bayesian tree inferred from LSU gene DNA sequences. Posterior probabilities exceeding 50 in A review of the genus Tripylina Brzeski, 1963 (Nematoda: Triplonchida), with descriptions of five new species from New Zealand

FIGURE 2. Bayesian tree inferred from LSU gene DNA sequences. Posterior probabilities exceeding 50% are given on appropriate clades. Nematode species, GenBank numbers, locations are listed for each taxon if known.

FIGURE 6. Bayesian tree from mitochondrial COI sequences for the Alpheus bouvieri A in Description of cryptic taxa within the Alpheus bouvieri A. Milne-Edwards, 1878 and A. hebes Kim and Abele, 1988 species complexes (Crustacea: Decapoda: Alpheidae)

FIGURE 6. Bayesian tree from mitochondrial COI sequences for the Alpheus bouvieri A. Milne-Edwards, 1878 and A. hebes Kim and Abele, 1988 species complexes. Numbers at nodes indicate posterior probability values. Results from maximum likelihood and neighbor-joining analyses produced very similar trees (not shown). Field collection numbers (numbers associated with each terminal) correspond to specimens from various localities on the Pacific coast of Panama (EP), Atlantic (Caribbean) coast of Panama (WA), Atol das Rocas, Brazil (WA-Br), and São Tomé (EA). The tree is rooted with three species of Alpheus not closely related to the species of Clade L.

FIGURES 1–6 in The cosmopolitan spider Cryptachaea blattea (Urquhart 1886) (Araneae: Theridiidae): Redescription, including COI sequence, and new synonymy

FIGURES 1–6. Cryptachaea blattea (Urquhart 1886). 1. Habitus of female, dorsal view; 2. Female abdomen, lateral view, small tubercle arrowed; 3. Epigynum, ventral view; 4. Internal genitalia, dorsal view; 5. Male pedipalp, ventral view; 6. Male abdomen, dorsal view. Scale bars for figures 1, 2, 6 = 1.0 mm, 3–5 = 0.1 mm. Abbreviations used: E, embolus; C, conductor; T, tegulum; Cy, cymbium; S, spermathecae.

FIGURE 5 Bayesian phylogenetic tree inferred from SSU gene DNA sequences. Posterior probabilities great than 50 in New Zealand species of the genus Tripyla Bastian, 1865 (Nematoda: Triplonchida: Tripylidae). I: A new species, a new record and key to long-tailed species

FIGURE 5 Bayesian phylogenetic tree inferred from SSU gene DNA sequences. Posterior probabilities great than 50% are given on appropriate clades. Nematode species, GenBank numbers, locations are listed for each taxon if known.

FIGURE 6 Bayesian phylogenetic tree inferred from LSU gene DNA sequences. Posterior probabilities greater than 50 in New Zealand species of the genus Tripyla Bastian, 1865 (Nematoda: Triplonchida: Tripylidae). I: A new species, a new record and key to long-tailed species

FIGURE 6 Bayesian phylogenetic tree inferred from LSU gene DNA sequences. Posterior probabilities greater than 50% are given on appropriate clades. Nematode species, GenBank numbers, locations are listed for each taxon if known.

opencc-by-nc-4.0Dec 2016View details →

Development and validation of a 36-gene sequencing assay for hereditary cancer risk assessment

<p>Sanger and MLPA datasets for the article "Development and validation of a 36-gene sequencing assay for hereditary cancer risk assessment" (http://dx.doi.org/10.1101/088252).</p>

FIGURE 4 in Bothaella manhi, a new species of tribe Aedini (Diptera: Culicidae) from the Cuc Phuong National Park of Vietnam based on morphology and DNA sequence

FIGURE 4. Bayesian phylogeny of the COII nucleotide dataset of the Culicidae collected in Vietnam and Thailand. Posterior probabilities (percent) of 80 or higher are shown for main clades only. See Table 3 for specimen collection data and accession numbers. All horizontal branch lengths are drawn to a scale of substitutions per site. The tree is rooted on An. minimus.

FIGURE 5 in Bothaella manhi, a new species of tribe Aedini (Diptera: Culicidae) from the Cuc Phuong National Park of Vietnam based on morphology and DNA sequence

FIGURE 5. Left: Dr Nguyen Duc Manh examining a rock-hole habitat of Bothaella larvae during mosquito surveys conducted in the Cuc Phuong National Park in July 2000. Right: Dr Manh (second from right) with field assistant Nguyen Hong Hanh (far left), Shelley Cook and Ralph Harbach outside the Molecular Biology Laboratory of the National Institute of Malariology, Parasitology and Entomology prior to field studies conducted in the same park in August 2008.

FIGURE 3 in Bothaella manhi, a new species of tribe Aedini (Diptera: Culicidae) from the Cuc Phuong National Park of Vietnam based on morphology and DNA sequence

FIGURE 3. Bayesian phylogeny of the "barcode" region of the COI nucleotide dataset of the Culicidae collected in Vietnam and Thailand. Posterior probabilities (percent) of 80 or higher are shown for main clades only. See Table 3 for specimen collection data and accession numbers. All horizontal branch lengths are drawn to a scale of substitutions per site. The tree is rooted on Anopheles minimus Theobald.

FIGURE 2 in Bothaella manhi, a new species of tribe Aedini (Diptera: Culicidae) from the Cuc Phuong National Park of Vietnam based on morphology and DNA sequence

FIGURE 2. Fourth-instar larva of Bothaella manhi: A, head, dorsal (left) and ventral (right) aspects of left side; B, thorax and abdominal segments I–VI, dorsal (left) and ventral (right) aspects of left side; C, abdominal segments VII–X, left side. A, antenna; C, cranium; CS, comb scale; P, prothorax; PS, pecten spine; M, mesothorax; S, siphon; T, metathorax; I–VIII and X, abdominal segments I–VIII and X; 1–15, setal numbers for specified areas, e.g. seta 5-C.

FIGURE 1 in Bothaella manhi, a new species of tribe Aedini (Diptera: Culicidae) from the Cuc Phuong National Park of Vietnam based on morphology and DNA sequence

FIGURE 1. Pupa and male genitalia of Bothaella manhi: A, pupa, left side of cephalothorax, dorsal to right; B, pupa, dorsal (left) and ventral (right) aspects of metathorax and abdomen; C, male genitalia, dorsal aspect (the sigmoidal seta, arrow, is diagnostic for the species). BML, basal mesal lobe; CT, cephalothorax; Gc, gonocoxite; Gs, gonostylus; Pa, paddle; Pr, proctiger; I–VIII, abdominal segments I–VIII; 1–14, setal numbers for specified areas, e.g. seta 3-I.