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FIGURE 8 in Hidden in plain sight: two new species of decapod crustaceans (Palaemonidae and Porcellanidae) discovered in the Red Sea on a university campus in Saudi Arabia
FIGURE 8. Enosteoides habibi sp. nov., holotype, male (cl 8.1 mm, cw 7.5 mm) from Thuwal, Saudi Arabia, FLMNH UF 71320; A, carapace (in contrasting lateral light to show sculpture), dorsal; B, same, detail of frontal margin, dorsal; C, carapace and frontal appendages, anterolateral; D, same, anterior; E, antennules, lateral (ventral); F, left third maxilliped, lateral (ventral); G, right cheliped, lateral (dorsal); H, same, chela, anterolateral; I, three posterior pleonites and telson, dorsal (ventral view as tucked under cephalothorax).
FIGURE 7 in Hidden in plain sight: two new species of decapod crustaceans (Palaemonidae and Porcellanidae) discovered in the Red Sea on a university campus in Saudi Arabia
FIGURE 7. Enosteoides habibi sp. nov., paratype, male (cl 5.5 mm, cw 5.2 mm) from Thuwal, Saudi Arabia (specimen lost, see text), chelipeds (first pereiopods); A, left cheliped, lateral (dorsal); B, same, mesial (ventral); C, same, chela, mesial (ventral); D, right first pereiopod, lateral (dorsal); E, same, mesial (ventral); F, same, chela, mesial (ventral); G, same, ischium, mesial (ventral); H, same, chela, lateral (dorsal). Large part of granulation and setation omitted, especially in A, B and H.
FIGURE 4 in Hidden in plain sight: two new species of decapod crustaceans (Palaemonidae and Porcellanidae) discovered in the Red Sea on a university campus in Saudi Arabia
FIGURE 4. Palaemonella jamila sp. nov., holotype, male (pocl 4.2 mm, cl 7.4 mm) from Thuwal, Saudi Arabia, FLMNH UF 71319; A, shrimp in life, dorsal; B, same, lateral. Photographs: A. Anker.
FIGURE 3 in Hidden in plain sight: two new species of decapod crustaceans (Palaemonidae and Porcellanidae) discovered in the Red Sea on a university campus in Saudi Arabia
FIGURE 3. Palaemonella jamila sp. nov., paratype, female (pocl 4.4 mm, cl 7.8 mm) from Thuwal, Saudi Arabia (specimen lost, see text); A, shrimp in life, dorsal; B, same, lateral. Photographs: A. Anker.
FIGURE 6 in Hidden in plain sight: two new species of decapod crustaceans (Palaemonidae and Porcellanidae) discovered in the Red Sea on a university campus in Saudi Arabia
FIGURE 6. Enosteoides habibi sp. nov., paratype, male (cl 5.5 mm, cw 5.2 mm) from Thuwal, Saudi Arabia (specimen lost, see text); A, carapace, dorsal (showing main tubercles and granular ridges, some omitted); B, same, right lateral; C, frontal area, ventral; D, same, anterior; E, branchiostegium and pterygostomial flap, ventrolateral; F, sternum, ventral; G, telson and sixth pleonite, dorsal (ventral view as tucked under cephalothorax); H, left antennule, basal article, ventral; I, right third maxilliped, lateral (ventral); J, right second pereiopod, lateral; K, same, distal portion of propodus and dactylus, lateral; L, right third pereiopod, lateral; M, right fourth pereiopod, lateral; N, right fifth pereiopod, lateral; O, right second pleopod, posterior (ventral).
FIGURE 2 in Hidden in plain sight: two new species of decapod crustaceans (Palaemonidae and Porcellanidae) discovered in the Red Sea on a university campus in Saudi Arabia
FIGURE 2. Palaemonella jamila sp. nov., paratype, female (pocl 4.4 mm, cl 7.8 mm) from Thuwal, Saudi Arabia (specimen lost, see text); A, right first pereiopod, lateral; B, same, distal portion of carpus and chela, mesial; C, same, lateral, slightly enlarged; D, right second pereiopod, lateral; E, same, mesial (coxa and basis omitted); F, same, distal portion of carpus and chela, lateral; G, same, distal portion of chela palm and fingers slightly open, lateral; H, right third pereiopod, lateral; I, same, distal portion of propodus and dactylus, lateral; J, same, mesial; K, right fourth pereiopod, lateral; L, right fifth pereiopod, lateral; M, same, distal portion of propodus and dactylus, lateral; N, same, mesial.
FIGURE 1 in Hidden in plain sight: two new species of decapod crustaceans (Palaemonidae and Porcellanidae) discovered in the Red Sea on a university campus in Saudi Arabia
FIGURE 1. Palaemonella jamila sp. nov., paratype, female (pocl 4.4 mm, cl 7.8 mm) from Thuwal, Saudi Arabia (specimen lost, see text); A, anterior region of carapace and cephalic appendages, dorsal; B, same, right lateral; C, carapace, left lateral; D, rostrum, right lateral; E, pleon, posterior part of fifth and sixth pleonite, right lateral; F, telson, dorsal; G, right antennal scaphocerite, dorsal; H, right mandible, lateral; I, same, mesial; J, right maxillule, lateral; K, right maxilla, lateral; L, right first maxilliped, lateral; M, right second maxilliped, lateral; N, same, detail of epipod and podobranch, mesial; O, right third maxilliped, lateral; P, right uropod, dorsal. Setae omitted in C, D, F, G and P.
FIGURE 5. Palaemonella aliska Marin, 2008 in Hidden in plain sight: two new species of decapod crustaceans (Palaemonidae and Porcellanidae) discovered in the Red Sea on a university campus in Saudi Arabia
FIGURE 5. Palaemonella aliska Marin, 2008, female (pocl 3.4 mm, cl 5.5 mm) from Al Fahal reef off Thuwal, Saudi Arabia, FLMNH UF 36078; shrimp in life, dorsolateral (right second pereiopod regenerating). Photograph: A. Anker.
Ancient hybridization leads to the repeated evolution of red flowers across a monkeyflower radiation
<p>The re-use of old genetic variation can promote rapid diversification in evolutionary radiations, but in most cases, the historical events underlying this divergence are not known. For example, ancient hybridization can generate new combinations of alleles that sort into descendant lineages, potentially providing the raw material to initiate divergence. In the <em>Mimulus</em> <em>aurantiacus</em> species complex, there is evidence for widespread gene flow among members of this radiation. In addition, allelic variation in the <em>MaMyb2</em> gene is responsible for differences in flower color between the closely related ecotypes of subspecies <em>puniceus</em>, contributing to reproductive isolation by pollinators. Previous work suggested that <em>MaMyb2</em> was introgressed into the red-flowered ecotype of <em>puniceus</em>. However, additional taxa within the radiation have independently evolved red flowers from their yellow-flowered ancestors, raising the possibility that this introgression had a more ancient origin. In this study, we used repeated tests of admixture from whole-genome sequence data across this diverse radiation to demonstrate that there has been both ancient and recurrent hybridization in this group. However, most of the signal of this ancient introgression has been removed due to selection, suggesting that widespread barriers to gene flow are in place between taxa. Yet, a roughly 30 kb region that contains the <em>MaMyb2</em> gene is currently shared only among the red-flowered taxa. Patterns of admixture, sequence divergence, and extended haplotype homozygosity across this region confirm a history of ancient hybridization, where functional variants have been preserved due to positive selection in red-flowered taxa but lost in their yellow-flowered counterparts. The results of this study reveal that selection against gene flow can reduce genomic signatures of ancient hybridization, but that historical introgression can provide essential genetic variation that facilitates the repeated evolution of phenotypic traits between lineages.</p>
Dataset for "SUPER Scheme in Action: Experimental Demonstration of Red-Detuned Excitation of a Quantum Emitter"
<p>Dataset for <strong>"SUPER Scheme in Action: Experimental Demonstration of Red-Detuned Excitation of a Quantum Emitter"</strong>.</p> <p>This dataset contains data for <a href="https://pubs.acs.org/doi/full/10.1021/acs.nanolett.2c01783">https://pubs.acs.org/doi/full/10.1021/acs.nanolett.2c01783</a></p> <p>The data is in either <strong>.txt or .csv f</strong>ormat. The zip file <strong>"SUPERDataset"</strong> includes the following folders and data:</p> <ul> <li>Dataset for Figure 3(a) <ul> <li>Folder <strong>.\Figure3\Experiment</strong> <ul> <li><strong>"2D_counts.txt"</strong> as Z matrix of 2D map</li> <li><strong> "delta2_vec.txt"</strong> as X axis of 2D map</li> <li><strong>"trans2_vec.txt"</strong> as Y axis of 2D map</li> </ul> </li> </ul> </li> <li>Dataset for Figure 3(b) <ul> <li> folder <strong>.\Figure3\Theory</strong> <ul> <li><strong>"2D_theory.txt"</strong> as Z matrix of Theory 2D Map</li> <li><strong>"delta2_vec.txt"</strong> as X axis of Theory 2D Map</li> <li><strong>"trans2_vec.txt"</strong> as Y axis of Theory 2D Map</li> </ul> </li> </ul> </li> <li>Dateset for Figure 3(c) <ul> <li>folder <strong>.\Figure3\Experiment</strong> <ul> <li><strong>"Line_cut_10p5meV.txt"</strong> <strong>, "Line_cut_10p6meV.txt" , "Line_cut_10p9meV.txt"</strong> are linecuts of 2D map</li> </ul> </li> </ul> </li> <li>Dataset for Figure 4(a) <ul> <li>folder <strong>.\SUPER_vs_TPE</strong> <ul> <li><strong>"SUPER.txt"</strong> includes 2 columns. The first column corresponds to the power, and the second column corresponds to the counts(a.u.).</li> <li><strong>"TPE.txt" </strong>includes 2 columns. The first column corresponds to the power, and the second column corresponds to the counts(a.u.).</li> </ul> </li> </ul> </li> <li>Dataset for Figure 4(b) <ul> <li>Folder <strong>.\</strong> <ul> <li><strong>"Spectra_SUPER_emission.txt" </strong>includes 2 columns. The first column corresponds to the wavelenght(nm), and the second column corresponds to the counts(a.u.).</li> </ul> </li> </ul> </li> <li>Dataset for Figure (4c) <ul> <li>Folder <strong>.\</strong> <ul> <li><strong>"g2_100ps.txt" </strong>includes 2 columns. The first column corresponds to the Time(ps), and the second column corresponds to the coincidences.</li> </ul> </li> </ul> </li> <li>Dataset for Supporting Information <ul> <li><strong>"Blinking-200ps-NotNormalized.txt" </strong>shows the blinking data. It includes 2 columns. The first column corresponds to the Time(ps), and the second column corresponds to the coincidences.</li> <li><strong>"lifetime-1ps.txt"</strong> shows the blinking data. It includes 2 columns. The first column corresponds to the Time(ps), and the second column corresponds to the coincidences.</li> </ul> </li> </ul> <p> </p> <p>How to extract data:</p> <p><strong>Windows:</strong></p> <ol> <li> <p>Locate the .zip file on your computer. In this case, the zip file is named "SUPERDataset".</p> </li> <li> <p>Right-click on the .zip file and select "Extract All" from the context menu. This will open the extraction wizard.</p> </li> </ol> <p><strong>macOS:</strong></p> <ol> <li> <p>Locate the .zip file on your computer. In this case, the zip file is named "SUPERDataset".</p> </li> <li> <p>Double-click on the .zip file. macOS will automatically extract the contents of the .zip file to the same location.</p> </li> </ol> <p><strong>Linux:</strong></p> <ol> <li> <p>Open a terminal window.</p> </li> <li> <p>Navigate to the directory where the .zip file is located using the <code>cd</code> command.</p> </li> <li> <p>Run the following command to unzip the file:<br> </p> <pre><code class="language-bash">unzip SUPERDataset.zip</code></pre> <p> </p> </li> </ol>
FIGURE 6 in Redescription of Ophlitaspongia (?) arbuscula Row, 1911 and Ophlitaspongia (?) horrida Row, 1911 from the Red Sea, and their placement in Clathria (Clathria) Schmidt, 1862
FIGURE 6. Ophlitaspongia (?) horrida the fresh material NIOF FD100. A. A Section through the fresh material NIOF FD100, B. A hymedesmioid of auxiliary styles or/and echinating (acantho)styles. C. A flattened basal layer of spongin with no hymedesmioid of auxiliary styles, or the auxiliary styles in the basal layer may be scarce and hard to find. D. The ectosomal skeleton is consisting mainly of densely matted brushes of (subtylo)styles.
FIGURE 4 in Redescription of Ophlitaspongia (?) arbuscula Row, 1911 and Ophlitaspongia (?) horrida Row, 1911 from the Red Sea, and their placement in Clathria (Clathria) Schmidt, 1862
FIGURE 4. Ophlitaspongia (?) horrida. A. the holotype BMNH 1912.2.1.63. B. the holotype BMNH 1912.2.1.63. C. Underwater photograph of O. horrida specimen QM G339443. D. Preserved specimens of QM G339443.
FIGURE 3 in Redescription of Ophlitaspongia (?) arbuscula Row, 1911 and Ophlitaspongia (?) horrida Row, 1911 from the Red Sea, and their placement in Clathria (Clathria) Schmidt, 1862
FIGURE 3. Ophlitaspongia (?) arbuscula Row, 1911. A & B. Sections of NIOF GRRF8000. C & D. Spicules of NIOF GRRF8000, showing (subtylo)styles, (acantho)style.
FIGURE 2 in Redescription of Ophlitaspongia (?) arbuscula Row, 1911 and Ophlitaspongia (?) horrida Row, 1911 from the Red Sea, and their placement in Clathria (Clathria) Schmidt, 1862
FIGURE 2. Ophlitaspongia (?) arbuscula Row, 1911. A. section of the holotype BMNH 1912.2.1.65. B. section of the holotype BMNH 1912.2.1.65. C. Spicules of the holotype BMNH 1912.2.1.65, showing (subtylo)styles, an (acantho)style and in the top left hand corner the arrow points to a toxa. D. Section through the holotype BMNH 1912.2.1.65, showing the (acantho)styles echinating from the fibre.
FIGURE 5 in Redescription of Ophlitaspongia (?) arbuscula Row, 1911 and Ophlitaspongia (?) horrida Row, 1911 from the Red Sea, and their placement in Clathria (Clathria) Schmidt, 1862
FIGURE 5. Ophlitaspongia (?) horrida the holotype BMNH 1912.2.1.63. A section through the holotype BMNH 1912.2.1.63. B. A magnified section through the holotype BMNH 1912.2.1.63, showing the dense brushes of spicules in the ectosome. C. Style diversity in the holotype. D. (Acantho)styles in the holotype. E. Toxas in the holotype.
FIGURE 1 in A new deep-water species of Discias Rathbun, 1902 (Decapoda: Caridea: Disciadidae) from the Gulf of Aqaba, northern Red Sea
FIGURE 1. Discias forsskali sp. nov., Saudi Arabian side of Gulf of Aqaba, northern Red Sea, holotype, ovigerous female (pocl 2.7 mm, cl 3.8 mm), FLMNH UF 68639: A, habitus, right lateral (fourth pereiopod missing, drawn based on its left side homolog); B, frontal region, lateral; C, rostral region and eyes, dorsal; D, detail of rostrum, dorsal; E, left antenna, ventral; F, left mandible, mesial; G, same, lateral; H, same, detail of molar process; I, left maxillule, lateral; J, left maxilla, lateral; K, left first maxilliped, lateral; L, left second maxilliped, lateral; M, left third maxilliped, lateral; N, same, ultimate article, dorsomesial.
FIGURE 2 in A new deep-water species of Discias Rathbun, 1902 (Decapoda: Caridea: Disciadidae) from the Gulf of Aqaba, northern Red Sea
FIGURE 2. Discias forsskali sp. nov., Saudi Arabian side of Gulf of Aqaba, northern Red Sea, holotype, ovigerous female (pocl 2.7 mm, cl 3.8 mm), FLMNH UF 68639: A, left first pereiopod, lateral; B, same, mesial; C, same, chela, ventral; D, same, distal portion of chela, dorsal; E, right first pereiopod, distal portion of chela, ventral; F, left second pereiopod, lateral; G, same, carpus and chela, ventral (mesial); H, same, carpus and chela, dorsal (lateral); I, left third pereiopod, lateral; J, same, distal portion of carpus, propodus and dactylus, lateral; K, left fourth pereiopod, lateral; L, same, distal portion of carpus, propodus and dactylus, lateral; M, left fifth pereiopod, lateral; N, same, distal portion of carpus, propodus and dactylus, lateral; O, telson and right uropod, dorsal; P, telson, distal margin.
Red Sea surface temperature
<p>Daily sea-surface temperature observations from the years 1985 to 2015 (inclusive), for 16703 regularly-spaced locations across the Red Sea; see Donlon et al. (2012) for details.</p><p> </p><p>These data have been analysed by Hazra and Huser (2021), Simpson and Wadsworth (2021), Simpson et al. (2023), and Sainsbury-Dale et al. (2023), among others.</p><p> </p><p>## References</p><p>- Donlon, C. J., Martin, M., Stark, J., Roberts-Jones, J., Fiedler, E., and Wimmer, W. (2012). The operational sea surface temperature and sea ice analysis (OSTIA) system. *Remote Sensing of Environment*, 116:140–158.</p><p>- Hazra, A. and Huser, R. (2021). Estimating high-resolution Red Sea surface temperature hotspots, using a low-rank semiparametric spatial model. *Annals of Applied Statistics*, 15:572–596.</p><p>- Sainsbury-Dale, M., Zammit-Mangion, A., and Huser, R. (2023) Likelihood-free parameter estimation with neural Bayes estimators. doi:10.1080/00031305.2023.2249522.</p><p>- Simpson, E. S., Opitz, T., and Wadsworth, J. L. (2023). High-dimensional modeling of spatial and spatio-temporal conditional extremes using INLA and Gaussian Markov random fields. *Extremes*, to appear.</p><p>- Simpson, E. S. and Wadsworth, J. L. (2021). Conditional modelling of spatio-temporal extremes for Red Sea surface temperatures. *Spatial Statistics*, 41(100482).</p>
Perrot et al _ data _ Use of linear features by red-legged partridges in an intensive agricultural landscape
<p>Dataset about the article "<strong>Use of linear features by red-legged partridges in an intensive agricultural landscape: implications for landscape management in farmland"</strong></p>
Physicochemical characteristics and antioxidant activities of polysaccharides from red seaweeds
<p>Figure S1: <sup>1</sup>H NMR spectra of <em>Chondrus crispus </em>(CC), <em>Palmaria palmate </em>(PP)<em>, Ahnfeltiopsis devoniensis </em>(AD), <em>Sarcodiotheca gaudichaudii </em>(SG). <sup>1</sup>H-NMR spectroscopy showed the full spectrum: 0.0 to 9.0 ppm</p> <p>Figure S2: Spectroscopic analysis of <em>Chondrus crispus </em>extracts 2D HC-HSQC spectra A) CC1A, B) CC2B, C) AD3A, D) SG1A, E) PP2B;</p> <p>Figure S3:<em> </em>2D spectra (CC2A, CC2B) based on HSQCs with k- and i-standards carrageenans samples</p>
ScienceDex guides
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These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.