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3,139
datasets available to search
ShareScore release 0.9.0
Dataset results
3,139 results for “fitting”
The ultra-sensitive Nodewalk technique identifies stochastic from virtual, population-based enhancer hubs regulating MYC in 3D: Implications for the fitness of cancer cells [GRO-seq]
GEO Series GSE76043. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Distinct TNF Receptors Dictate Stem Cell Fitness Versus Lineage Output in Clonal Hematopoiesis of Aging
GEO Series GSE189406. Mus musculus. 28 samples. Type: Expression profiling by high throughput sequencing.
Identifying non-genetic determinants of malignant clonal fitness at single cell resolution [chemo barcode-seq]
GEO Series GSE186304. Mus musculus. 66 samples. Type: Other.
Mll5 is Required for Hematopoietic Stem Cell Fitness and Homeostasis
GEO Series GSE10817. Mus musculus. 4 samples. Type: Expression profiling by array.
FIT Links c-Myc and P53 Acetylation by Recruiting RBBP7 During Carcinogenesis of Colorectal Cancer
GEO Series GSE211804. Homo sapiens. 10 samples. Type: Expression profiling by high throughput sequencing.
SETD2 Mutations Do Not Contribute to Clonal Fitness in Response to Chemotherapy in Childhood B Acute Lymphoblastic Leukemia (WES)
GEO Series GSE231723. Homo sapiens. 12 samples. Type: Other.
Intercellular nanotube-mediated mitochondrial transfer enhances T-cell metabolic fitness and antitumor efficacy
GEO Series GSE229487. Mus musculus. 9 samples. Type: Expression profiling by high throughput sequencing.
Post-transcriptional regulation can harness genome instability and provide phenotypic robustness during fitness gain in the human parasite Leishmania donovani
GEO Series GSE165615. Leishmania donovani. 15 samples. Type: Expression profiling by high throughput sequencing.
High-throughput Fitness Experiments Reveal Specific Vulnerabilities of Human-Adapted Salmonella During Stress and Infection- Barseq4 (InSPI2, hydrogen peroxide (H2O2), nitric oxide (NO), sodium hypoch
GEO Series GSE261860. Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150; Salmonella enterica subsp. enterica serovar Typhimurium str. D23580; Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74; Salmonella enterica subsp. enterica serovar Typhi str. Ty2. 40 samples. Type: Other.
Anti-uPAR CAR T cells reverse and prevent aging-associated defects in intestinal regeneration and fitness
GEO Series GSE301534. Mus musculus. 20 samples. Type: Expression profiling by high throughput sequencing.
Hsf1 promotes hematopoietic stem cell fitness and proteostasis in response to ex vivo culture stress and aging II
GEO Series GSE179413. Mus musculus. 12 samples. Type: Expression profiling by high throughput sequencing.
Rio1 downregulates centromeric RNA levels to promote the timely assembly of structurally fit kinetochores.
GEO Series GSE189278. Saccharomyces cerevisiae. 4 samples. Type: Expression profiling by high throughput sequencing.
Fits files
<p>These are the fits files corresponding to all 113 observed ULXs in our 8-year-long survey. We also include a region file of all ULXs.</p>
FITS data file for Learn Astropy Celestial Coords #1 tutorial
<p>This is for hosting the fits data file of the planetary nebula NGC 7293 for use in the Learn Astropy Celestial Coords #1 tutorial. </p>
Fitness to Steady State vs Boolean Model Performance for AGS cell line
<p>For the investigation/analysis based on this dataset, see this report: <a href="https://druglogics.github.io/gitsbe-model-analysis/cascade/fit-perf-ags/main.html">https://druglogics.github.io/gitsbe-model-analysis/cascade/fit-perf-ags/main.html</a></p>
MESA files for paper "Progenitor properties of type II supernovae: fitting to hydrodynamical models using Markov chain Monte Carlo methods"
<p>Inlists to reproduce the pre-SN simulations of the paper "Progenitor properties of type II supernovae: fitting to hydrodynamical models using Markov chain Monte Carlo methods". These simulations were performed using MESA version 10398.</p>
3x 1 µs all-atom MD trajectories; AMBER ff15ipq & SPC/Eb; T4 Lysozyme; 'Fitting side-chain NMR relaxation data using molecular simulations'
<p>Simulation data for "Fitting side-chain NMR relaxation data using molecular simulations" (https://doi.org/10.1101/2020.08.18.256024).</p> <ul> <li>3 x 1 µs all-atom MD simulations of T4 Lysozyme</li> <li>Force field: AMBER ff15ipq with modified methyl rotation barriers<sup>1</sup></li> <li>Water model: SPC/Eb</li> <li>Compressed protein coordinates saved every 1 ps to enable calculation of side-chain NMR relaxation parameters</li> </ul> <p>Contains:</p> <ul> <li>3 x GROMACS .xtc trajectory files for 3 independent simulations</li> <li>3 x corresponding GROMACS .tpr topology files</li> </ul> <p><sup>1</sup> Hoffmann, F., Mulder, F. A. A., & Schäfer, L. V. (2020). Predicting NMR relaxation of proteins from molecular dynamics simulations with accurate methyl rotation barriers. <em>Journal of Chemical Physics</em>, <em>152</em>(8). https://doi.org/10.1063/1.5135379</p>
5x 1 µs all-atom MD trajectories; AMBER ff99SB*-ILDN & TIP4P/2005; T4 Lysozyme; 'Fitting side-chain NMR relaxation data using molecular simulations'
<p>Simulation data for "Fitting side-chain NMR relaxation data using molecular simulations" (https://doi.org/10.1101/2020.08.18.256024).</p> <ul> <li>5 x 1 µs all-atom MD simulations of T4 Lysozyme</li> <li>Force field: AMBER ff99SB*-ILDN with modified methyl rotation barriers<sup>1</sup></li> <li>Water model: TIP4P/2005</li> <li>Compressed protein coordinates saved every 1 ps to enable calculation of side-chain NMR relaxation parameters</li> </ul> <p>Contains:</p> <ul> <li>5 x GROMACS .xtc trajectory files for 5 independent simulations</li> <li>5 x corresponding GROMACS .tpr topology files</li> </ul> <p><sup>1</sup> Hoffmann, F., Mulder, F. A. A., & Schäfer, L. V. (2018). Accurate Methyl Group Dynamics in Protein Simulations with AMBER Force Fields. <em>The Journal of Physical Chemistry B</em>, <em>122</em>(19), 5038–5048. https://doi.org/10.1021/acs.jpcb.8b02769</p>
3x 5 µs all-atom MD trajectories; AMBER ff99SB*-ILDN & TIP4P/2005; T4 Lysozyme; 'Fitting side-chain NMR relaxation data using molecular simulations'
<p>Simulation data for "Fitting side-chain NMR relaxation data using molecular simulations" (https://doi.org/10.1101/2020.08.18.256024).</p> <ul> <li>3 x 5 µs all-atom MD simulations of T4 Lysozyme</li> <li>Force field: AMBER ff99SB*-ILDN with modified methyl rotation barriers<sup>1</sup></li> <li>Water model: TIP4P/2005</li> <li>Compressed protein coordinates saved every 1 ps to enable calculation of side-chain NMR relaxation parameters</li> </ul> <p>Contains:</p> <ul> <li>3 x GROMACS .xtc trajectory files for 3 independent simulations</li> <li>3 x corresponding GROMACS .tpr topology files</li> </ul> <p><sup>1</sup> Hoffmann, F., Mulder, F. A. A., & Schäfer, L. V. (2018). Accurate Methyl Group Dynamics in Protein Simulations with AMBER Force Fields. <em>The Journal of Physical Chemistry B</em>, <em>122</em>(19), 5038–5048. https://doi.org/10.1021/acs.jpcb.8b02769</p>
Corner plots of MgII emission line fits for z~6 quasars
<p>Corner plots for the MgII emission line fits for ten z~6 quasars shown in Fig. 10 from this paper: https://ui.adsabs.harvard.edu/abs/2020arXiv200201811E/abstract. Model parameters and fitting procedure are described in section 4.2.</p>
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.